RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 AKR1B10O60218 316 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 MMEP08473 750 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 PDGFRBP09619 1106 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 CHRNB2P17787 502 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 LMO2P25791 158 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 SSTR3P32745 418 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 GNL1P36915 607 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 BPIFB4P59827 614 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 FMO1Q01740 532 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 CDR2Q01850 454 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 ELAVL2Q12926 359 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 ASTE1Q2TB18 679 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 HS1BP3Q53T59 392 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 KIAA0319Q5VV43 1072 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 OVOS1Q6IE37 1185 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 TOGARAM2Q6ZUX3 1019 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 METTL23Q86XA0 190 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 PALB2Q86YC2 1186 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 GLYCTKQ8IVS8 523 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 SPATA18Q8TC71 538 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 DDX1Q92499 740 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 TMEM176AQ96HP8 235 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 CCDC42Q96M95 316 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 AGPAT1Q99943 283 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 RTP3Q9BQQ7 232 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 SYT15Q9BQS2 421 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 FAM49BQ9NUQ9 324 aa12.26□□□□□ -0.45
CALCOCO2-202ENST00000372317 FAM170AA1A519 330 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 O00370 1275 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 DDX3XO00571 662 aaKnown RBP eCLIP12.25□□□□□ -0.456e-13■■■■□ 20.1
CALCOCO2-202ENST00000372317 ARHGEF15O94989 841 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 NDUFA10O95299 355 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 FAM163BP0C2L3 166 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 CCDC130P13994 396 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 MYOGP15173 224 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 FGFR3P22607 806 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 ANXA13P27216 316 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 PCSK1P29120 753 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 PPM1AP35813 382 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 LHX1P48742 406 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 YWHAHQ04917 246 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 GFPT1Q06210 699 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 RTP2Q5QGT7 225 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 VPS36Q86VN1 386 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 CEP57Q86XR8 500 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 PASD1Q8IV76 773 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 RNF168Q8IYW5 571 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 B3GALNT2Q8NCR0 500 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 ACRBPQ8NEB7 543 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 OR10T2Q8NGX3 314 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 TMEM169Q96HH4 297 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 HEXIM2Q96MH2 286 aaKnown RBP12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 PCDHB18PQ96TA0 734 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 LPIN3Q9BQK8 851 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 HERC2P3Q9BVR0 1158 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 AAASQ9NRG9 546 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 SPG21Q9NZD8 308 aa12.25□□□□□ -0.45
CALCOCO2-202ENST00000372317 A0A087X0T9 212 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 LINC01553A4QN01 128 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CARNS1A5YM72 827 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 M0QYV0 167 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ZNF263O14978 683 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ATP2C2O75185 946 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 EFEMP2O95967 443 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CFHP08603 1231 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 FAM228BP0C875 321 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 VDRP11473 427 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CTNNB1P35222 781 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 BMS1Q14692 1282 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 SLC18A3Q16572 532 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 GOLGA7BQ2TAP0 167 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 SGO2Q562F6 1265 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 MDH1BQ5I0G3 518 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 INTS6LQ5JSJ4 861 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ZNF677Q86XU0 584 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CCDC170Q8IYT3 715 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 C12orf29Q8N999 325 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ZNF606Q8WXB4 792 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CLP1Q92989 425 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 TNIP3Q96KP6 325 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CRTAC1Q9NQ79 661 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ADAMTS1Q9UHI8 967 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 CDH9Q9ULB4 789 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 NENFQ9UMX5 172 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 ZKSCAN5Q9Y2L8 839 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 REXO2Q9Y3B8 237 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 PCDHB12Q9Y5F1 795 aa12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 EPN1Q9Y6I3 576 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO2-202ENST00000372317 VWA8A3KMH1 1905 aa12.23□□□□□ -0.45
CALCOCO2-202ENST00000372317 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
CALCOCO2-202ENST00000372317 MED7O43513 233 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms