RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 VARS2Q5ST30 1063 aaKnown RBP16.88■□□□□ 0.29
TMEM53-204ENST00000372243 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 CCDC112Q8NEF3 446 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 EPS8L1Q8TE68 723 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 RTP3Q9BQQ7 232 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 HERC2P3Q9BVR0 1158 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 PBX4Q9BYU1 374 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 CDH9Q9ULB4 789 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
TMEM53-204ENST00000372243 PDE4DIPQ5VU43 2346 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 SSU72P8A0A1W2PR75 194 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 H7C4K7 107 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 VDRP11473 427 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 GNA15P30679 374 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 CTNNB1P35222 781 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 CYP26C1Q6V0L0 522 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 ANKS3Q6ZW76 656 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 KLHL23Q8NBE8 558 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 PIK3R5Q8WYR1 880 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 TGS1Q96RS0 853 aaKnown RBP16.87■□□□□ 0.29
TMEM53-204ENST00000372243 BAG1Q99933 345 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-204ENST00000372243 HAUS4Q9H6D7 363 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 MSRAQ9UJ68 235 aa16.87■□□□□ 0.29
TMEM53-204ENST00000372243 NOCTQ9UK39 431 aaKnown RBP16.87■□□□□ 0.29
TMEM53-204ENST00000372243 YBX2Q9Y2T7 364 aaKnown RBP16.87■□□□□ 0.29
TMEM53-204ENST00000372243 A0A1W2PPC1 479 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 PDGFRBP09619 1106 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 ANXA13P27216 316 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 ERVK-21P61565 698 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 DSG1Q02413 1049 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 UBE3AQ05086 875 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-204ENST00000372243 STILQ15468 1287 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
TMEM53-204ENST00000372243 RTP2Q5QGT7 225 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 ZNF280DQ6N043 979 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 TAS1R1Q7RTX1 841 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 CEP57Q86XR8 500 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 TMEM139Q8IV31 216 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 DDX1Q92499 740 aaKnown RBP16.86■□□□□ 0.29
TMEM53-204ENST00000372243 SYT11Q9BT88 431 aa16.86■□□□□ 0.29
TMEM53-204ENST00000372243 PUF60Q9UHX1 559 aaKnown RBP16.86■□□□□ 0.29
TMEM53-204ENST00000372243 LAMA2P24043 3122 aaKnown RBP16.86■□□□□ 0.29
TMEM53-204ENST00000372243 OR6C75A6NL08 312 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 NRDCO43847 1150 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 TBC1D4O60343 1298 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 SKILP12757 684 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 PBX2P40425 430 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 GLUD2P49448 558 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 SMAD3P84022 425 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 TAP1Q03518 808 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ACOT1Q86TX2 421 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 NOP9Q86U38 636 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 B3GALNT2Q8NCR0 500 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ZNF606Q8WXB4 792 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 HEXIM2Q96MH2 286 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 CHP1Q99653 195 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 SYT15Q9BQS2 421 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 C17orf80Q9BSJ5 609 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 C11orf84Q9BUA3 381 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 DPEP3Q9H4B8 488 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ACP6Q9NPH0 428 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 BACE2Q9Y5Z0 518 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 PLXNA4Q9HCM2 1894 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 MED7O43513 233 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 HCRTO43612 131 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 CD19P15391 556 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 PTPN1P18031 435 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 TSPY1Q01534 308 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 CDR2Q01850 454 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ORC1Q13415 861 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 BMS1Q14692 1282 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 SGO2Q562F6 1265 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 INTS6LQ5JSJ4 861 aaKnown RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 KIAA0319Q5VV43 1072 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ARHGAP17Q68EM7 881 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 FAM171BQ6P995 826 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 ZNF571Q7Z3V5 609 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 AGPAT1Q99943 283 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-204ENST00000372243 MTRRQ9UBK8 725 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 PCDHGC3Q9UN70 934 aa16.85■□□□□ 0.29
TMEM53-204ENST00000372243 THAP12O43422 761 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 URODP06132 367 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 CTSAP10619 480 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 ACAT1P24752 427 aaKnown RBP16.84■□□□□ 0.29
TMEM53-204ENST00000372243 CNGA2Q16280 664 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 ASTE1Q2TB18 679 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms