RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ERVK-5Q9HDB9 667 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 PDLIM7Q9NR12 457 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ZMYND8Q9ULU4 1186 aaPredicted RBP12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ACTL7BQ9Y614 415 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 ALG6Q9Y672 507 aa12.15□□□□□ -0.47
TSPAN1-201ENST00000372003 UMODL1Q5DID0 1318 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 SMIM35A0A1B0GVV1 85 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 P4HA2O15460 535 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 DGAT1O75907 488 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 UBOX5O94941 541 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 VTNP04004 478 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 CTSHP09668 335 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 CYP2C18P33260 490 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 MAN1A1P33908 653 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 RFC5P40937 340 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 RPL21P46778 160 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 RGS19P49795 217 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 CCL23P55773 120 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 MYO1EQ12965 1108 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 GRIK3Q13003 919 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 PRPF4BQ13523 1007 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 EMC2Q15006 297 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 EXOC3L1Q86VI1 746 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 SLC9A9Q8IVB4 645 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 KIAA0319LQ8IZA0 1049 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 AGAP11Q8TF27 550 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 TMEM174Q8WUU8 243 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 CKAP2Q8WWK9 683 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 DHX33Q9H6R0 707 aaKnown RBP12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 APEX2Q9UBZ4 518 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 TBX21Q9UL17 535 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 GINS2Q9Y248 185 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
TSPAN1-201ENST00000372003 ABLIM1O14639 778 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 TGFB1I1O43294 461 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CKBP12277 381 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 KRT13P13646 458 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CCNB1P14635 433 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 RAG1P15918 1043 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 ITGB8P26012 769 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 COILP38432 576 aaPredicted RBP12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 GPC5P78333 572 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 ATP11AP98196 1134 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 BFSP2Q13515 415 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 PARP6Q2NL67 630 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 ZNF618Q5T7W0 954 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 FAM102BQ5T8I3 360 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 RINT1Q6NUQ1 792 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CCDC137Q6PK04 289 aaKnown RBP12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CEP128Q6ZU80 1094 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 MAIP1Q8WWC4 291 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 ALG3Q92685 438 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 KLHL29Q96CT2 875 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 TBC1D31Q96DN5 1066 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 AGPAT1Q99943 283 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 RUSC1Q9BVN2 902 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 GPR88Q9GZN0 384 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 LRRC19Q9H756 370 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 GPRC5CQ9NQ84 441 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 XPNPEP1Q9NQW7 623 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 ABCF3Q9NUQ8 709 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 DMAC2Q9NW81 257 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 KCND2Q9NZV8 630 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CTNNAL1Q9UBT7 734 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 CORO1CQ9ULV4 474 aaPredicted RBP12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 RPL26L1Q9UNX3 145 aaKnown RBP12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 PPME1Q9Y570 386 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
TSPAN1-201ENST00000372003 IGKV6-21A0A0C4DH24 114 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 GCNT3O95395 438 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 GZMAP12544 262 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 ITIH2P19823 946 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 CASP4P49662 377 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 PEX5P50542 639 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 TRIM71Q2Q1W2 868 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 SPATA21Q7Z572 469 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 RHPN2Q8IUC4 686 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 KSR1Q8IVT5 923 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 SCLYQ96I15 445 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 INTS2Q9H0H0 1204 aaKnown RBP12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 THAP2Q9H0W7 228 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 USP20Q9Y2K6 914 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
TSPAN1-201ENST00000372003 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms