RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 FASTKD3Q14CZ7 662 aaKnown RBP12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ZPBP2Q6X784 338 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CD302Q8IX05 232 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SNF8Q96H20 258 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 TMEM134Q9H6X4 195 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 GPATCH2LQ9NWQ4 482 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 COX16Q9P0S2 106 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CAPN7Q9Y6W3 813 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 GOLGA6L7A0A1B0GV03 622 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 DYNC1LI2O43237 492 aaPredicted RBP12.41□□□□□ -0.42
PDE6C-201ENST00000371447 MTA2O94776 668 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 ARF4P18085 180 aaPredicted RBP12.41□□□□□ -0.42
PDE6C-201ENST00000371447 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 SCINQ9Y6U3 715 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 PSME4Q14997 1843 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 EVPLQ92817 2033 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 CCL15-CCL14A0A0B4J2E2 113 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 SPAG7O75391 227 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 SLC25A27O95847 323 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 AKAP5P24588 427 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 TMED2Q15363 201 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 CCL15Q16663 113 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 FAM102AQ5T9C2 384 aaPredicted RBP12.41□□□□□ -0.42
PDE6C-201ENST00000371447 GPRC5AQ8NFJ5 357 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 SEC14L1Q92503 715 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 ARHGEF2Q92974 986 aaKnown RBP12.41□□□□□ -0.42
PDE6C-201ENST00000371447 ELAC2Q9BQ52 826 aaKnown RBP12.41□□□□□ -0.42
PDE6C-201ENST00000371447 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
PDE6C-201ENST00000371447 H3BRB1 525 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 HBP1O60381 514 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 CST8O60676 142 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 MYBL1P10243 752 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 ASPAP45381 313 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 MMRN1Q13201 1228 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 C15orf59Q2T9L4 293 aaPredicted RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 ZNF677Q86XU0 584 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 ART4Q93070 314 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 HPDLQ96IR7 371 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 PIWIL1Q96J94 861 aaKnown RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 TUT1Q9H6E5 874 aaKnown RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 LRRC19Q9H756 370 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 AAASQ9NRG9 546 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 PARP2Q9UGN5 583 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 TMEM191CA6NGB0 347 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 TULP2O00295 520 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 PPEF2O14830 753 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 SLC1A1P43005 524 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 FNTAP49354 379 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 CLDN10P78369 228 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 MBTD1Q05BQ5 628 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 RFX6Q8HWS3 928 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 KCTD6Q8NC69 237 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 MORC4Q8TE76 937 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 NGRNQ9NPE2 291 aaKnown RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 CACNG4Q9UBN1 327 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 KIF13BQ9NQT8 1826 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 CXCL11O14625 94 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 GH1P01241 217 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 PTP4A2Q12974 167 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 SNAPC2Q13487 334 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 CCDC62Q6P9F0 684 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 CYP4X1Q8N118 509 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDE6C-201ENST00000371447 OSMRQ99650 979 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 XYLT2Q9H1B5 865 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 IFT122Q9HBG6 1241 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 SLC12A6Q9UHW9 1150 aa12.4□□□□□ -0.42
PDE6C-201ENST00000371447 FAM189A1O60320 539 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 RPS6KA5O75582 802 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 RARGP13631 454 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 IL1R2P27930 398 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 PHKA2P46019 1235 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 YARSP54577 528 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 MCL1Q07820 350 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 AUHQ13825 339 aaKnown RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 SLMAPQ14BN4 828 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 NPNTQ6UXI9 565 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 ZBED8Q8IZ13 594 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 TRIM6Q9C030 488 aaPredicted RBP12.39□□□□□ -0.43
PDE6C-201ENST00000371447 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
PDE6C-201ENST00000371447 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms