RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
GPC3-201ENST00000370818 PHF2O75151 1096 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 AP1G2O75843 785 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 TNNC2P02585 160 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
GPC3-201ENST00000370818 FLT3P36888 993 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 C1QBPQ07021 282 aaKnown RBP13.57□□□□□ -0.24
GPC3-201ENST00000370818 DAB2IPQ5VWQ8 1189 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 SCARA5Q6ZMJ2 495 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 ABHD16BQ9H3Z7 469 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 LACTBL1A8MY62 500 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 TRAPPC3O43617 180 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 IL18RAPO95256 599 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 MMP8P22894 467 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 PTGIRP43119 386 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 MYO1EQ12965 1108 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 GRIK4Q16099 956 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 CYP1B1Q16678 543 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 DUPD1Q68J44 220 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 CXorf38Q8TB03 319 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 TFAP2BQ92481 460 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 ERP44Q9BS26 406 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 DPH5Q9H2P9 285 aa13.57□□□□□ -0.24
GPC3-201ENST00000370818 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.57□□□□□ -0.243e-8■■■■■ 41.7
GPC3-201ENST00000370818 PROSCO94903 275 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 RARAP10276 462 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 MCF2P10911 925 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 TMOD1P28289 359 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 CHRNA3P32297 505 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 SLC1A1P43005 524 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 SSR1P43307 286 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 DHX34Q14147 1143 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 LIN9Q5TKA1 542 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 JAMLQ86YT9 394 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 CCT6BQ92526 530 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 TRIM31Q9BZY9 425 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 HOMER3Q9NSC5 361 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 PCYOX1Q9UHG3 505 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 BAIAP2L1Q9UHR4 511 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 C5orf60A6NFR6 353 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 ENO4A6NNW6 628 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 O00370 1275 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 ATP2C2O75185 946 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 SNUPNO95149 360 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 GJB6O95452 261 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 HPDP32754 393 aaPredicted RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 UAP1Q16222 522 aaPredicted RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 CST9Q5W186 159 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 CAPRIN2Q6IMN6 1127 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 KIAA0319LQ8IZA0 1049 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 OR6J1Q8NGC5 347 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 RAB17Q9H0T7 212 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 FAM114A2Q9NRY5 505 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
GPC3-201ENST00000370818 ANK1P16157 1881 aa13.56□□□□□ -0.24
GPC3-201ENST00000370818 FAM187AA6NFU0 413 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 TSPAN1O60635 241 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 ANP32DO95626 131 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 PECAM1P16284 738 aaPredicted RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 DGKDQ16760 1214 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 IQSEC1Q6DN90 963 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 WDTC1Q8N5D0 677 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 ARFGAP2Q8N6H7 521 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 NLRP7Q8WX94 980 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 ITFG2Q969R8 447 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 HERPUD2Q9BSE4 406 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 KDM4CQ9H3R0 1056 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 TMBIM4Q9HC24 238 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 MRPL47Q9HD33 250 aaKnown RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 C15orf41Q9Y2V0 281 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 MGAMO43451 1857 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 TCRBV5S1A1TA0A578 114 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 FSCN2O14926 492 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 LSM8O95777 96 aaKnown RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 KRT19P08727 400 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 GHRP10912 638 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 HSD17B3P37058 310 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 RPL7AP62424 266 aaKnown RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 TNFAIP2Q03169 654 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 RBBP5Q15291 538 aaKnown RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 HIBCHQ6NVY1 386 aaPredicted RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 CCDC137Q6PK04 289 aaKnown RBP13.55□□□□□ -0.24
GPC3-201ENST00000370818 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 BCO2Q9BYV7 579 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 ZDHHC18Q9NUE0 388 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 CPA4Q9UI42 421 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 SCINQ9Y6U3 715 aa13.55□□□□□ -0.24
GPC3-201ENST00000370818 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms