RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 RGS2P41220 211 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 RAB27AP51159 221 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 EEF1DP3Q658K8 133 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 PPP1R16BQ96T49 567 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 PRMT1Q99873 361 aaKnown RBP10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 ACP6Q9NPH0 428 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 SLC12A6Q9UHW9 1150 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 PCDHB4Q9Y5E5 795 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 IL18RAPO95256 599 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 SLC10A3P09131 477 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 CYP2B6P20813 491 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 OSTNP61366 133 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 LAMB3Q13751 1172 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 ANKRD20A2Q5SQ80 823 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 ANKRD20A1Q5TYW2 823 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 ANKRD20A3Q5VUR7 823 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 ARHGEF26Q96DR7 871 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 ANKRD36BP1Q96IX9 119 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 CDT1Q9H211 546 aa10.58□□□□□ -0.72
PRPF38B-203ENST00000370025 A6NJR5 290 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ABL2P42684 1182 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ERFP50548 548 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 TUBP50607 506 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 PAPOLAP51003 745 aaKnown RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 SREBF2Q12772 1141 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ZNF513Q8N8E2 541 aaPredicted RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 MAB21L3Q8N8X9 362 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 MTMR12Q9C0I1 747 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 APOBEC3GQ9HC16 384 aaKnown RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 MCF2P10911 925 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 GJC1P36383 396 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 CDC42EP1Q00587 391 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 KYAT1Q16773 422 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 SGSM1Q2NKQ1 1148 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 SOCS4Q8WXH5 440 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 GDF3Q9NR23 364 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 TNPO2O14787 897 aaKnown RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 B4GALT4O60513 344 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 KRT16P08779 473 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 IQCF3P0C7M6 154 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 DRD4P21917 467 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 HADHBP55084 474 aaKnown RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 TCEAL1Q15170 157 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ACAD10Q6JQN1 1059 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 TLK2Q86UE8 772 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 NT5DC3Q86UY8 548 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ZNF410Q86VK4 478 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 DDX1Q92499 740 aaKnown RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 SETD4Q9NVD3 440 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
PRPF38B-203ENST00000370025 ADCY6O43306 1168 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CSDE1O75534 798 aaKnown RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ASS1P00966 412 aaKnown RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 OLFML2BQ68BL8 750 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 TMEM270Q6UE05 265 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 RUFY4Q6ZNE9 571 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 EBF2Q9HAK2 575 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 BATF3Q9NR55 127 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 FLRT1Q9NZU1 646 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ZMYND8Q9ULU4 1186 aaPredicted RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 STXBP5LQ9Y2K9 1186 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 FOXO6A8MYZ6 492 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CST3P01034 146 aaPredicted RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ZNF865P0CJ78 1059 aaPredicted RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 POU5F1Q01860 360 aaKnown RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CLEC16AQ2KHT3 1053 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 MARCH8Q5T0T0 291 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 TRPM8Q7Z2W7 1104 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 KIAA0319LQ8IZA0 1049 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 USP6NLQ92738 828 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ZNF653Q96CK0 615 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 APBA2Q99767 749 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ADPGKQ9BRR6 497 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ZSWIM8A7E2V4 1837 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 GPR25O00155 361 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 STAG3L1P0CL83 205 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ITGA4P13612 1032 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ACO1P21399 889 aaKnown RBP10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CPT1AP50416 773 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 MYL6P60660 151 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CCL14Q16627 93 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 B4GALNT2Q8NHY0 566 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 WHAMMQ8TF30 809 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 CPB2Q96IY4 423 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 ZFATQ9P243 1243 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 GTF3C4Q9UKN8 822 aa10.56□□□□□ -0.72
PRPF38B-203ENST00000370025 hCG_2014768A0A024R1R8 64 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 CXCL8P10145 99 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 ARF4P18085 180 aaPredicted RBP10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 AMHR2Q16671 573 aa10.55□□□□□ -0.72
PRPF38B-203ENST00000370025 RNF220Q5VTB9 566 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms