RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PHACTR2O75167 634 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 EOMESO95936 686 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 TNNC2P02585 160 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 FGFR1P11362 822 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 SCNN1GP51170 649 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 GPC5P78333 572 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 IKBKEQ14164 716 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 GLIPR1L2Q4G1C9 344 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
UBE3D-203ENST00000369747 RASGEF1CQ8N431 466 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 CXorf38Q8TB03 319 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 AENQ8WTP8 325 aaKnown RBP18.43■□□□□ 0.54
UBE3D-203ENST00000369747 PGBD4Q96DM1 585 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 HTATIP2Q9BUP3 242 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 GOLGA2P5Q9HBQ8 144 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 CEP290O15078 2479 aa18.43■□□□□ 0.54
UBE3D-203ENST00000369747 DDX3YO15523 660 aaKnown RBP18.42■□□□□ 0.54
UBE3D-203ENST00000369747 ITGB3P05106 788 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 OAS2P29728 719 aaKnown RBP18.42■□□□□ 0.54
UBE3D-203ENST00000369747 PIK3CAP42336 1068 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 SOX4Q06945 474 aaPredicted RBP18.42■□□□□ 0.54
UBE3D-203ENST00000369747 NCOA4Q13772 614 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 CLLU1OSQ5K130 101 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 CRIPAKQ8N1N5 446 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 FAM81BQ96LP2 452 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 KRT12Q99456 494 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 TMEM161AQ9NX61 479 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 DPP3Q9NY33 737 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 INPP5FQ9Y2H2 1132 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 DERAQ9Y315 318 aa18.42■□□□□ 0.54
UBE3D-203ENST00000369747 H3BQF6 201 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
UBE3D-203ENST00000369747 POMCP01189 267 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 KRT19P08727 400 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 KRT5P13647 590 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 TNFRSF8P28908 595 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 WDR44Q5JSH3 913 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 SPOPLQ6IQ16 392 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 NT5DC4Q86YG4 428 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 PPP1R10Q96QC0 940 aaKnown RBP18.41■□□□□ 0.54
UBE3D-203ENST00000369747 RPS6KC1Q96S38 1066 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.54
UBE3D-203ENST00000369747 CTTNBP2NLQ9P2B4 639 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 CACNG4Q9UBN1 327 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 ZMYND8Q9ULU4 1186 aaPredicted RBP18.41■□□□□ 0.54
UBE3D-203ENST00000369747 MYL6P60660 151 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 DCAF12L1Q5VU92 463 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 C11orf63Q6NUN7 778 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 DPF3Q92784 378 aa18.41■□□□□ 0.54
UBE3D-203ENST00000369747 CALR3Q96L12 384 aaKnown RBP18.41■□□□□ 0.54
UBE3D-203ENST00000369747 PPEF2O14830 753 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 TNRC18O15417 2968 aaPredicted RBP18.4■□□□□ 0.54
UBE3D-203ENST00000369747 MTA2O94776 668 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 CALCAP01258 141 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 THP07101 528 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 GLI1P08151 1106 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 POLR2BP30876 1174 aaKnown RBP18.4■□□□□ 0.54
UBE3D-203ENST00000369747 TNNT3P45378 269 aaPredicted RBP18.4■□□□□ 0.54
UBE3D-203ENST00000369747 GATMP50440 423 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 EPHB4P54760 987 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 TNNC1P63316 161 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 OTOP2Q7RTS6 562 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 GDAP1L1Q96MZ0 367 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 VIPAS39Q9H9C1 493 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 APOBEC3GQ9HC16 384 aaKnown RBP18.4■□□□□ 0.54
UBE3D-203ENST00000369747 IL23AQ9NPF7 189 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 UBN1Q9NPG3 1134 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 UBQLN1Q9UMX0 589 aaKnown RBP18.4■□□□□ 0.54
UBE3D-203ENST00000369747 PCDHB7Q9Y5E2 793 aa18.4■□□□□ 0.54
UBE3D-203ENST00000369747 LTBP2Q14767 1821 aa18.39■□□□□ 0.54
UBE3D-203ENST00000369747 ATMINO43313 823 aaPredicted RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 TRPC3Q13507 836 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 GLB1LQ6UWU2 654 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 BEST2Q8NFU1 509 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 XYLT2Q9H1B5 865 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 ELAC1Q9H777 363 aaKnown RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 GDF3Q9NR23 364 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 ALG6Q9Y672 507 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 SCN1AP35498 2009 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 CLSTN1O94985 981 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 HEXIM1O94992 359 aaKnown RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 UPP2O95045 317 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 ASS1P00966 412 aaKnown RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 CYP1A2P05177 515 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 ACO1P21399 889 aaKnown RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 FPGSQ05932 587 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 CLEC16AQ2KHT3 1053 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 KLHL7Q8IXQ5 586 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 GTF3C4Q9UKN8 822 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 ITGA11Q9UKX5 1188 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 LRFN2Q9ULH4 789 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 TTC7AQ9ULT0 858 aaPredicted RBP18.39■□□□□ 0.53
UBE3D-203ENST00000369747 HPCAL4Q9UM19 191 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 NUB1Q9Y5A7 615 aa18.39■□□□□ 0.53
UBE3D-203ENST00000369747 TDRD15B5MCY1 1934 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms