RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 KITP10721 976 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 MYL2P10916 166 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 GLRA2P23416 452 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 KDSRQ06136 332 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 NMUR2Q9GZQ4 415 aa12.94□□□□□ -0.34
PHGDH-201ENST00000369407 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-201ENST00000369407 ARL4CP56559 192 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 IZUMO2Q6UXV1 221 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 RHPN2Q8IUC4 686 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 ACER1Q8TDN7 264 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 TUBGCP5Q96RT8 1024 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 SYNCQ9H7C4 482 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 KCNK13Q9HB14 408 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 SAR1AQ9NR31 198 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 GINM1Q9NU53 330 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 TCRBV7S3A2A0A539 114 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 B2RBV5 119 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 PLSCR1O15162 318 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 ITGB5P18084 799 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 CRKP46108 304 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 RARRES1P49788 294 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
PHGDH-201ENST00000369407 SPP2Q13103 211 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 MAMLD1Q13495 774 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 UGCGQ16739 394 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 BBS9Q3SYG4 887 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 SCARA3Q6AZY7 606 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 PYROXD1Q8WU10 500 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 GORASP1Q9BQQ3 440 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 ZC3H12CQ9C0D7 883 aaKnown RBP12.93□□□□□ -0.34
PHGDH-201ENST00000369407 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 IVNS1ABPQ9Y6Y0 642 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 FCHO1O14526 889 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 GSTT1P30711 240 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 SLC1A1P43005 524 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 GDF10P55107 478 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 OCRLQ01968 901 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 CUL3Q13618 768 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 CENPUQ71F23 418 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 RBM17Q96I25 401 aaKnown RBP12.93□□□□□ -0.34
PHGDH-201ENST00000369407 FAM213AQ9BRX8 229 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 MECRQ9BV79 373 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 UBE2OQ9C0C9 1292 aaKnown RBP12.93□□□□□ -0.34
PHGDH-201ENST00000369407 TMEM8AQ9HCN3 771 aa12.93□□□□□ -0.34
PHGDH-201ENST00000369407 UTRNP46939 3433 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 F8VP50 259 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ABLIM1O14639 778 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 GPC3P51654 580 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 AP1B1Q10567 949 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 MFSD4BQ5TF39 518 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 RELL1Q8IUW5 271 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 GATA6Q92908 595 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 VTI1AQ96AJ9 217 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ZNF184Q99676 751 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 FBXO28Q9NVF7 368 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 DENND3A2RUS2 1198 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ALOX15BO15296 676 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 TMEM62Q0P6H9 643 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 HIF1AQ16665 826 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 CMPK2Q5EBM0 449 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 RNASEH2BQ5TBB1 312 aaKnown RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 TDRPQ86YL5 185 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 TREML1Q86YW5 311 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 CFAP61Q8NHU2 1237 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 FAM81AQ8TBF8 368 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 SUDS3Q9H7L9 328 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-201ENST00000369407 PI4KBQ9UBF8 816 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 ZNF232Q9UNY5 417 aa12.92□□□□□ -0.34
PHGDH-201ENST00000369407 MAGEA13PA6NCF6 341 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 LPXNO60711 386 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 ATP6V1G1O75348 118 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 FAM155BO75949 473 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 ZWINTO95229 277 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SERPINB2P05120 415 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 LYNP07948 512 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 WNT7BP56706 349 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 RASA2Q15283 850 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 DBN1Q16643 649 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SMTNL2Q2TAL5 461 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 TMEM270Q6UE05 265 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 MON1BQ7L1V2 547 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 FBXO36Q8NEA4 188 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms