RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 DHRS4L1P0CG22 281 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 RPL5P46777 297 aaKnown RBP17■□□□□ 0.31
CHD1L-203ENST00000369259 VAMP7P51809 220 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 AQP4P55087 323 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 GPX6P59796 221 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
CHD1L-203ENST00000369259 NOP14P78316 857 aaKnown RBP17■□□□□ 0.31
CHD1L-203ENST00000369259 KDSRQ06136 332 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 MORF4L2Q15014 288 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 GRIK5Q16478 980 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 UGT2A3Q6UWM9 527 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 ZNF554Q86TJ5 538 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
CHD1L-203ENST00000369259 GLIS1Q8NBF1 620 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 FAM20AQ96MK3 541 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 KREMEN1Q96MU8 473 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 TIMMDC1Q9NPL8 285 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 SEL1LQ9UBV2 794 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 NHSQ6T4R5 1651 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 ZSCAN5DPP0CG00 497 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 BGNP21810 368 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
CHD1L-203ENST00000369259 ANKRD20A4Q4UJ75 823 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 LPCAT4Q643R3 524 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 MAML3Q96JK9 1138 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 RTFDC1Q9BY42 306 aaPredicted RBP17■□□□□ 0.31
CHD1L-203ENST00000369259 USP29Q9HBJ7 922 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 KCNK4Q9NYG8 393 aa17■□□□□ 0.31
CHD1L-203ENST00000369259 SMIM18P0DKX4 95 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 CDK4P11802 303 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 TBL3Q12788 808 aaKnown RBP16.99■□□□□ 0.31
CHD1L-203ENST00000369259 GPS1Q13098 491 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 MYBPC2Q14324 1141 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 EFTUD2Q15029 972 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■□□ 18.3
CHD1L-203ENST00000369259 KLHDC10Q6PID8 442 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 MAP7D3Q8IWC1 876 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 LRRC43Q8N309 656 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 KCTD17Q8N5Z5 321 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 ZBTB8BQ8NAP8 495 aaPredicted RBP16.99■□□□□ 0.31
CHD1L-203ENST00000369259 CRYGNQ8WXF5 182 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 SHC3Q92529 594 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 LENG9Q96B70 501 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 PAFAH2Q99487 392 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 DHRS4Q9BTZ2 278 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 PPARGC1AQ9UBK2 798 aaKnown RBP16.99■□□□□ 0.31
CHD1L-203ENST00000369259 TMEM221A6NGB7 291 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 LPXNO60711 386 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 GTF2H1P32780 548 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 PHBP35232 272 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 BTDP43251 543 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 ARSEP51690 589 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 MFAP3P55082 362 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 CBX3Q13185 183 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 MDH1BQ5I0G3 518 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 DUS1LQ6P1R4 473 aaKnown RBP16.99■□□□□ 0.31
CHD1L-203ENST00000369259 ANKMY2Q8IV38 441 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 PPM1KQ8N3J5 372 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 PYDC1Q8WXC3 89 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 C1orf21Q9H246 121 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■■■■■ 81.5
CHD1L-203ENST00000369259 PICK1Q9NRD5 415 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 DDX18Q9NVP1 670 aaKnown RBP16.99■□□□□ 0.31
CHD1L-203ENST00000369259 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 SSX2IPQ9Y2D8 614 aa16.99■□□□□ 0.31
CHD1L-203ENST00000369259 NDC80O14777 642 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 STRNO43815 780 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 ETV4P43268 484 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 TMED1Q13445 227 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 TFDP1Q14186 410 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 SYDE2Q5VT97 1194 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 RNF111Q6ZNA4 994 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 GSTCDQ8NEC7 633 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 DIS3LQ8TF46 1054 aaKnown RBP16.98■□□□□ 0.31
CHD1L-203ENST00000369259 GDPD5Q8WTR4 605 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 TTC17Q96AE7 1141 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 STRIP2Q9ULQ0 834 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 NFASCO94856 1347 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
CHD1L-203ENST00000369259 C15orf38-AP3S2A0A0A6YYH1 394 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 LIASO43766 372 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 CLUHO75153 1309 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 ADRA2BP18089 450 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 ALDH1B1P30837 517 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 DCTN2Q13561 401 aaKnown RBP16.97■□□□□ 0.31
CHD1L-203ENST00000369259 CLEC16AQ2KHT3 1053 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 KLHL38Q2WGJ6 581 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 EFHC1Q5JVL4 640 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 ODR4Q5SWX8 454 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 RNASEH2BQ5TBB1 312 aaKnown RBP16.97■□□□□ 0.31
CHD1L-203ENST00000369259 ARPINQ7Z6K5 226 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 CLEC10AQ8IUN9 316 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 GAB3Q8WWW8 586 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 ADAMTS6Q9UKP5 1117 aa16.97■□□□□ 0.31
CHD1L-203ENST00000369259 ZNF148Q9UQR1 794 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms