RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 C18orf25Q96B23 403 aaPredicted RBP11.3□□□□□ -0.6
TPM3-212ENST00000368533 IMPG2Q9BZV3 1241 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 ETAA1Q9NY74 926 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 FBXL5Q9UKA1 691 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 COG5Q9UP83 839 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 COQ4Q9Y3A0 265 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 UTP11Q9Y3A2 253 aaKnown RBP11.3□□□□□ -0.6
TPM3-212ENST00000368533 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 P4HA2O15460 535 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 THAP12O43422 761 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 ASGR1P07306 291 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 RARBP10826 455 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
TPM3-212ENST00000368533 VEGFBP49765 207 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 SKOR1P84550 965 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 ZKSCAN8Q15776 578 aaPredicted RBP11.3□□□□□ -0.6
TPM3-212ENST00000368533 GDF6Q6KF10 455 aaPredicted RBP11.3□□□□□ -0.6
TPM3-212ENST00000368533 LRRC45Q96CN5 670 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 KIF12Q96FN5 646 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 TRIM51Q9BSJ1 452 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 HMGXB4Q9UGU5 601 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 NOCTQ9UK39 431 aaKnown RBP11.3□□□□□ -0.6
TPM3-212ENST00000368533 TNFSF13BQ9Y275 285 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 NRCAMQ92823 1304 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 ASAP2O43150 1006 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 HCRTO43612 131 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 GPR32O75388 356 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 CYBAP13498 195 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 CD19P15391 556 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 HOXA11P31270 313 aaPredicted RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 HSD17B3P37058 310 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 KIF22Q14807 665 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 HIBCHQ6NVY1 386 aaPredicted RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 AADACL2Q6P093 401 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 NT5DC3Q86UY8 548 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 C1orf127Q8N9H9 656 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 G3BP2Q9UN86 482 aaKnown RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 TNNC2P02585 160 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 CLTAP09496 248 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 PROZP22891 400 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 MESDQ14696 234 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 KCNA10Q16322 511 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 EXOC8Q8IYI6 725 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 RBBP8NLQ8NC74 664 aaPredicted RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 RFFLQ8WZ73 363 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ATP6V1G3Q96LB4 118 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 FAM167BQ9BTA0 163 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 ADAMTS10Q9H324 1103 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 AGAP1Q9UPQ3 857 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 SMIM23A6NLE4 172 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 GNA15P30679 374 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 GJC1P36383 396 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 CUL1Q13616 776 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
TPM3-212ENST00000368533 TUBGCP4Q9UGJ1 667 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 SIX4Q9UIU6 781 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
TPM3-212ENST00000368533 GOLGA6L10A0A0M3HER8 536 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 CCDC188H7C350 402 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 EIF4BP23588 611 aaKnown RBP11.28□□□□□ -0.6
TPM3-212ENST00000368533 YY1P25490 414 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 GTF2H1P32780 548 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 FLT3P36888 993 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 AFF1P51825 1210 aaKnown RBP11.28□□□□□ -0.6
TPM3-212ENST00000368533 SNX17Q15036 470 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 KRT71Q3SY84 523 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
TPM3-212ENST00000368533 WDR49Q8IV35 697 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 LPPQ93052 612 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 SYT11Q9BT88 431 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 NEUROG2Q9H2A3 272 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 CDH23Q9H251 3354 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 TLDC2A0PJX2 215 aa11.28□□□□□ -0.6
TPM3-212ENST00000368533 DUSP11O75319 330 aaKnown RBP11.28□□□□□ -0.6
TPM3-212ENST00000368533 SCTRP47872 440 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms