RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CREMQ03060 361 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 HYAL1Q12794 435 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 SYCP1Q15431 976 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 DUSP6Q16828 381 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 ARHGAP44Q17R89 818 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 ZNF394Q53GI3 561 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 LIMS2Q7Z4I7 341 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 GPR65Q8IYL9 337 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 PGLYRP2Q96PD5 576 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 LPIN3Q9BQK8 851 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 DPEP3Q9H4B8 488 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 CYP3A43Q9HB55 503 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
TPM3-211ENST00000368531 HMGXB4Q9UGU5 601 aa14.85□□□□□ -0.03
TPM3-211ENST00000368531 MTCL1Q9Y4B5 1905 aaKnown RBP14.84□□□□□ -0.03
TPM3-211ENST00000368531 LINC01565O15544 149 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 TBXAS1P24557 533 aaPredicted RBP14.84□□□□□ -0.03
TPM3-211ENST00000368531 PCSK1P29120 753 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 TSPY1Q01534 308 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 ROR1Q01973 937 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 RAB33AQ14088 237 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 SKIV2LQ15477 1246 aaKnown RBP14.84□□□□□ -0.03
TPM3-211ENST00000368531 CCDC142Q17RM4 750 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 RNF19BQ6ZMZ0 732 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 ACOT1Q86TX2 421 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 LRRTM3Q86VH5 581 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 SYT15Q9BQS2 421 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 ZCWPW1Q9H0M4 648 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 SIX2Q9NPC8 291 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 CISHQ9NSE2 258 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 FAM207AQ9NSI2 230 aaPredicted RBP14.84□□□□□ -0.03
TPM3-211ENST00000368531 APEX2Q9UBZ4 518 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 AJAP1Q9UKB5 411 aaPredicted RBP14.84□□□□□ -0.03
TPM3-211ENST00000368531 GTF3C4Q9UKN8 822 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 STXBP5LQ9Y2K9 1186 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 PCDHB4Q9Y5E5 795 aa14.84□□□□□ -0.03
TPM3-211ENST00000368531 A0A1B0GTH6 734 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 WDR27A2RRH5 827 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 TGM5O43548 720 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 GLUD1P00367 558 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 FAM163BP0C2L3 166 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 EPCAMP16422 314 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 USP8P40818 1118 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 NR1I3Q14994 352 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 SLC39A12Q504Y0 691 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 INTS6LQ5JSJ4 861 aaKnown RBP14.83□□□□□ -0.04
TPM3-211ENST00000368531 SLC8B1Q6J4K2 584 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 SPATA18Q8TC71 538 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 SLC22A17Q8WUG5 538 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 KREMEN1Q96MU8 473 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 TWNKQ96RR1 684 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 ACBD6Q9BR61 282 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 OXCT2Q9BYC2 517 aaPredicted RBP14.83□□□□□ -0.04
TPM3-211ENST00000368531 TMLHEQ9NVH6 421 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 DNAJC12Q9UKB3 198 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 CDH9Q9ULB4 789 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 BARX2Q9UMQ3 279 aaPredicted RBP14.83□□□□□ -0.04
TPM3-211ENST00000368531 HCFC2Q9Y5Z7 792 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 MYH10P35580 1976 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 LAMA3Q16787 3333 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 CHD9Q3L8U1 2897 aa14.83□□□□□ -0.04
TPM3-211ENST00000368531 MYBPHLA2RUH7 354 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 KRT5P13647 590 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 PTPN1P18031 435 aaKnown RBP14.82□□□□□ -0.04
TPM3-211ENST00000368531 CLCN4P51793 760 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 MFAP3P55082 362 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 YWHAEP62258 255 aaKnown RBP14.82□□□□□ -0.04
TPM3-211ENST00000368531 ADCY1Q08828 1119 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 RAPGEF1Q13905 1077 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 MDH1BQ5I0G3 518 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 KLHDC7AQ5VTJ3 777 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 IQCEQ6IPM2 695 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 PPFIBP1Q86W92 1011 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 DCP1BQ8IZD4 617 aaKnown RBP14.82□□□□□ -0.04
TPM3-211ENST00000368531 ATAD1Q8NBU5 361 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 VN1R2Q8NFZ6 395 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 NEK11Q8NG66 645 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 WHAMMQ8TF30 809 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 ERGIC2Q96RQ1 377 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 NT5C1AQ9BXI3 368 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 XPO4Q9C0E2 1151 aaKnown RBP14.82□□□□□ -0.04
TPM3-211ENST00000368531 ELOVL4Q9GZR5 314 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 CLDND1Q9NY35 253 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 ABI2Q9NYB9 513 aaPredicted RBP14.82□□□□□ -0.04
TPM3-211ENST00000368531 SIK3Q9Y2K2 1263 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 SLC27A5Q9Y2P5 690 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 FHOD1Q9Y613 1164 aa14.82□□□□□ -0.04
TPM3-211ENST00000368531 CHD7Q9P2D1 2997 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 PRRG1O14668 218 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 EPHB6O15197 1021 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 CILPO75339 1184 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 CALCAP01258 141 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 ELF1P32519 619 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 RAD23BP54727 409 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 POLR2FP61218 127 aaKnown RBP14.81□□□□□ -0.04
TPM3-211ENST00000368531 CYP27A1Q02318 531 aa14.81□□□□□ -0.04
TPM3-211ENST00000368531 GCNT1Q02742 428 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms