RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 WSCD1Q658N2 575 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 ZNF365Q70YC5 407 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 OLIG1Q8TAK6 271 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 ZNF606Q8WXB4 792 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 PCDHB18PQ96TA0 734 aa16.92■□□□□ 0.3
LMNA-203ENST00000368297 ARHGEF37A1IGU5 675 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 F8W810 466 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 CTIFO43310 598 aaKnown RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 PDGFRBP09619 1106 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 AARSP49588 968 aaKnown RBP eCLIP16.91■□□□□ 0.3
LMNA-203ENST00000368297 PSRC1Q6PGN9 363 aaPredicted RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 C16orf59Q7L2K0 433 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 LIMS2Q7Z4I7 341 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 METTL23Q86XA0 190 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 PALB2Q86YC2 1186 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TMEM86AQ8N2M4 240 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 LBHD1Q9BQE6 289 aaPredicted RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 COLEC11Q9BWP8 271 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 HCSTQ9UBK5 93 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TIMM13Q9Y5L4 95 aaPredicted RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 A0A0U1RQJ8 604 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 NRP1O14786 923 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TADA2AO75478 443 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 ALDH2P05091 517 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 ITGB1P05556 798 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 FAM163BP0C2L3 166 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 VDRP11473 427 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 SGO2Q562F6 1265 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 CD300LGQ6UXG3 332 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TRIM72Q6ZMU5 477 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 ACOT1Q86TX2 421 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 OSTM1Q86WC4 334 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 PASD1Q8IV76 773 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 ATRIPQ8WXE1 791 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TFAP2BQ92481 460 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 NAPGQ99747 312 aaPredicted RBP16.91■□□□□ 0.3
LMNA-203ENST00000368297 TMEM175Q9BSA9 504 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 KIAA1257Q9ULG3 409 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TFR2Q9UP52 801 aa16.91■□□□□ 0.3
LMNA-203ENST00000368297 TMEM189-UBE2V1I3L0A0 370 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 HCRTO43612 131 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 H2AFZP0C0S5 128 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 SLC11A1P49279 550 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 SPOUT1Q5T280 376 aaKnown RBP16.9■□□□□ 0.3
LMNA-203ENST00000368297 H2AFVQ71UI9 128 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 DNAAF5Q86Y56 855 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 SLC35F6Q8N357 371 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 SUSD3Q96L08 255 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
LMNA-203ENST00000368297 TAS2R14Q9NYV8 317 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 DSEQ9UL01 958 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 NENFQ9UMX5 172 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 STXBP5LQ9Y2K9 1186 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 NME7Q9Y5B8 376 aa16.9■□□□□ 0.3
LMNA-203ENST00000368297 RCCD1A6NED2 376 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 M0QZQ0 153 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 RTN2O75298 545 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 CFHP08603 1231 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 LMO2P25791 158 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 LHX1P48742 406 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 EPHB4P54760 987 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 SECISBP2LQ93073 1101 aaKnown RBP16.89■□□□□ 0.29
LMNA-203ENST00000368297 TNIP3Q96KP6 325 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 ZSWIM1Q9BR11 485 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.295e-7■■□□□ 13.2
LMNA-203ENST00000368297 PACSIN1Q9BY11 444 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 DPEP3Q9H4B8 488 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 PCDHB8Q9UN66 801 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 CEP83Q9Y592 693 aa16.89■□□□□ 0.29
LMNA-203ENST00000368297 PJA2O43164 708 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 FTLP02792 175 aaPredicted RBP16.88■□□□□ 0.29
LMNA-203ENST00000368297 GZMAP12544 262 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 ACAT1P24752 427 aaKnown RBP16.88■□□□□ 0.29
LMNA-203ENST00000368297 BTG3Q14201 252 aaPredicted RBP16.88■□□□□ 0.29
LMNA-203ENST00000368297 NAA35Q5VZE5 725 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 MNS1Q8NEH6 495 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 CYFIP2Q96F07 1278 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 YME1L1Q96TA2 773 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 LACRTQ9GZZ8 138 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 TRIM10Q9UDY6 481 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 ADAM28Q9UKQ2 775 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 TSC2P49815 1807 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 NT5C1B-RDH14C9J2C7 533 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 GABRDO14764 452 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 ABL1P00519 1130 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 GALTP07902 379 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 ABCB4P21439 1286 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 PBX3P40426 434 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 GALCP54803 685 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 BCAR1P56945 870 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 STILQ15468 1287 aa16.88■□□□□ 0.29
LMNA-203ENST00000368297 ACAD10Q6JQN1 1059 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms