RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CCNYL1Q8N7R7 359 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 NFKBIZQ9BYH8 718 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 TMEM117Q9H0C3 514 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 CASQ2O14958 399 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ADCY6O43306 1168 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 TLR2O60603 784 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 EFCAB14O75071 495 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ALDH1A2O94788 518 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 FBXO21O94952 628 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 RHBDL3P58872 404 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 SLC7A5Q01650 507 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 KLHL38Q2WGJ6 581 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 EPC2Q52LR7 807 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ATP11CQ8NB49 1132 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 C1orf131Q8NDD1 294 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 C1orf54Q8WWF1 131 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 SMPD4Q9NXE4 827 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 TEX33O43247 280 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 FGBP02675 491 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 NCF2P19878 526 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 IPMKQ8NFU5 416 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 CRLS1Q9UJA2 301 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 NFASCO94856 1347 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 ENDOD1O94919 500 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 DDX5P17844 614 aaKnown RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 APLP1P51693 650 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 KCNA1Q09470 495 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PPIGQ13427 754 aaKnown RBP eCLIP11.26□□□□□ -0.617e-7■□□□□ 9.8
PTPRK-205ENST00000368213 TRAPPC11Q7Z392 1133 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 TBC1D1Q86TI0 1168 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-205ENST00000368213 SPATA16Q9BXB7 569 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 FBXO44Q9H4M3 255 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 FHOD1Q9Y613 1164 aa11.26□□□□□ -0.61
PTPRK-205ENST00000368213 CCDC78A2IDD5 438 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 CDR2Q01850 454 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 PDIA2Q13087 525 aaKnown RBP11.25□□□□□ -0.61
PTPRK-205ENST00000368213 ZKSCAN8Q15776 578 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-205ENST00000368213 ZRANB3Q5FWF4 1079 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 TEKT4Q8WW24 435 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 NCKAP1Q9Y2A7 1128 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 USP2O75604 605 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-205ENST00000368213 F9P00740 461 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 CUL1Q13616 776 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 UNC45BQ8IWX7 931 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 GAD1Q99259 594 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 VCLP18206 1134 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 ARSEP51690 589 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
PTPRK-205ENST00000368213 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
PTPRK-205ENST00000368213 CYP2W1Q8TAV3 490 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 ATXN7L3BQ96GX2 97 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 STK38LQ9Y2H1 464 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 UMODL1Q5DID0 1318 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 SLC9A1P19634 815 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 PPM1AP35813 382 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 RGL4Q8IZJ4 473 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-205ENST00000368213 CBWD1Q9BRT8 395 aa11.25□□□□□ -0.61
PTPRK-205ENST00000368213 NBPF20Q3BBV1 942 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 SLC39A12Q504Y0 691 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 LZICQ8WZA0 190 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 MRPS23Q9Y3D9 190 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ADH1AP07327 375 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 VCPP55072 806 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 RNF10Q8N5U6 811 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 KRT35Q92764 455 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 CELF4Q9BZC1 486 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 KIF3CO14782 793 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ACAT1P24752 427 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 SYCP2LQ5T4T6 812 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ZBED8Q8IZ13 594 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 RABGGTAQ92696 567 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 TTC17Q96AE7 1141 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ACKR2O00590 384 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 INHAP05111 366 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 YWHAQP27348 245 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 MLH1P40692 756 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 SCNN1GP51170 649 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 RHOAP61586 193 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ART3Q13508 389 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 GIT2Q14161 759 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ZFATQ9P243 1243 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 STX7O15400 261 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 RTN3O95197 1032 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 NUMBP49757 651 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms