RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 KNOP1Q1ED39 458 aaKnown RBP25.4■■□□□ 1.66
SHC1-201ENST00000366442 MGAT5BQ3V5L5 792 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 SLC44A4Q53GD3 710 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 LMBRD2Q68DH5 695 aaPredicted RBP25.4■■□□□ 1.66
SHC1-201ENST00000366442 SCARA3Q6AZY7 606 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 DTWD2Q8NBA8 298 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 XXYLT1Q8NBI6 393 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 OR5B17Q8NGF7 314 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 ACBD6Q9BR61 282 aa25.4■■□□□ 1.66
SHC1-201ENST00000366442 DDX23Q9BUQ8 820 aaKnown RBP25.4■■□□□ 1.66
SHC1-201ENST00000366442 SCAND2PQ9GZW5 306 aaPredicted RBP25.4■■□□□ 1.66
SHC1-201ENST00000366442 FAM237AA0A1B0GTK4 181 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 PRPF40AO75400 957 aaKnown RBP25.39■■□□□ 1.66
SHC1-201ENST00000366442 SOAT2O75908 522 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 GJA1P17302 382 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 PSMD2Q13200 908 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 SNW1Q13573 536 aaKnown RBP25.39■■□□□ 1.66
SHC1-201ENST00000366442 VEPH1Q14D04 833 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 NFE2Q16621 373 aaPredicted RBP25.39■■□□□ 1.66
SHC1-201ENST00000366442 GOLGA5Q8TBA6 731 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 ZSCAN18Q8TBC5 510 aaPredicted RBP25.39■■□□□ 1.66
SHC1-201ENST00000366442 PHOX2BQ99453 314 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 DDX43Q9NXZ2 648 aaKnown RBP25.39■■□□□ 1.66
SHC1-201ENST00000366442 SIT1Q9Y3P8 196 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 PCDHB5Q9Y5E4 795 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 SNX9Q9Y5X1 595 aa25.39■■□□□ 1.66
SHC1-201ENST00000366442 A0A1W2PRU2 124 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 CLIC2O15247 247 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 HAPLN1P10915 354 aaPredicted RBP25.38■■□□□ 1.65
SHC1-201ENST00000366442 ATF6P18850 670 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 LHX1P48742 406 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 CYP2J2P51589 502 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 MYL7Q01449 175 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 CYP24A1Q07973 514 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 PSMD6Q15008 389 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 DPH6Q7L8W6 267 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 LIMS2Q7Z4I7 341 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 PJA1Q8NG27 643 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 DNASE1L2Q92874 299 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 E2F7Q96AV8 911 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 EXOC1Q9NV70 894 aa25.38■■□□□ 1.65
SHC1-201ENST00000366442 KANSL1LA0AUZ9 987 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 GABRDO14764 452 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 GAREM2Q75VX8 874 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 RDH13Q8NBN7 331 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 FAM200AQ8TCP9 573 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 DEPDC1BQ8WUY9 529 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 HPDLQ96IR7 371 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 CHAMP1Q96JM3 812 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 FNBP1Q96RU3 617 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 LPIN3Q9BQK8 851 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 TRMT61BQ9BVS5 477 aaKnown RBP25.37■■□□□ 1.65
SHC1-201ENST00000366442 SLITRK6Q9H5Y7 841 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 ZNF334Q9HCZ1 680 aaPredicted RBP25.37■■□□□ 1.65
SHC1-201ENST00000366442 ABI2Q9NYB9 513 aaPredicted RBP25.37■■□□□ 1.65
SHC1-201ENST00000366442 DLGAP2Q9P1A6 1054 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 MYO15AQ9UKN7 3530 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 USP34Q70CQ2 3546 aa25.37■■□□□ 1.65
SHC1-201ENST00000366442 PSMC3P17980 439 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 SYKP43405 635 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 STK4Q13043 487 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 SOWAHAQ2M3V2 549 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 INTS6LQ5JSJ4 861 aaKnown RBP25.36■■□□□ 1.65
SHC1-201ENST00000366442 VITQ6UXI7 678 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 TRAPPC11Q7Z392 1133 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 ADGRF2Q8IZF7 708 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 TMEM174Q8WUU8 243 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 PKMYT1Q99640 499 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 CGRRF1Q99675 332 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 OSBPL6Q9BZF3 934 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 FOXQ1Q9C009 403 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 ABCB6Q9NP58 842 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 TRPV5Q9NQA5 729 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 TMLHEQ9NVH6 421 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 FAM86C1Q9NVL1 165 aa25.36■■□□□ 1.65
SHC1-201ENST00000366442 A0A1W2PQ27 194 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 A0A1W2PQ64 194 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 A0A1W2PQD8 194 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 DLATP10515 647 aaKnown RBP25.35■■□□□ 1.65
SHC1-201ENST00000366442 TNNI1P19237 187 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 GABRR2P28476 465 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 PCSK1P29120 753 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 KMT5BQ4FZB7 885 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 MFSD6LQ8IWD5 586 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 KIAA0895Q8NCT3 520 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 IRF7Q92985 503 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 ATXN3LQ9H3M9 355 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 BRD9Q9H8M2 597 aa25.35■■□□□ 1.65
SHC1-201ENST00000366442 DCNP07585 359 aaKnown RBP25.34■■□□□ 1.65
SHC1-201ENST00000366442 CDC25CP30307 473 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 VIPR2P41587 438 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 NDUFA8P51970 172 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 GRM2Q14416 872 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 ANGPT1Q15389 498 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 ARHGAP15Q53QZ3 475 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 OSTM1Q86WC4 334 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 CCDC127Q96BQ5 260 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 MKNK1Q9BUB5 465 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 IL21Q9HBE4 155 aa25.34■■□□□ 1.65
SHC1-201ENST00000366442 PROB1E7EW31 1015 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms