RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 ADAM2Q99965 735 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 VKORC1Q9BQB6 163 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 SPATA5L1Q9BVQ7 753 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 TRIM54Q9BYV2 358 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 NUP62CLQ9H1M0 184 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 UNKLQ9H9P5 680 aaKnown RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZMAT3Q9HA38 289 aaKnown RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 KIAA1586Q9HCI6 787 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 ETAA1Q9NY74 926 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 OGDHLQ9ULD0 1010 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 SHOC2Q9UQ13 582 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 WDR33Q9C0J8 1336 aaKnown RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 CCDC151A5D8V7 595 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PRSS29PA6NIE9 313 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 BTN3A1O00481 513 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PRC1O43663 620 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PEX1O43933 1283 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 VPS4BO75351 444 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 SUN1O94901 812 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 KRT18P05783 430 aaKnown RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 SRGNP10124 158 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 MYBP10242 640 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 EGR2P11161 476 aaPredicted RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PHKG2P15735 406 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 NPR1P16066 1061 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 RHCEP18577 417 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PEX2P28328 305 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 GCLCP48506 637 aaPredicted RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PTTG1IPP53801 180 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 NXPH1P58417 271 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 RHDQ02161 417 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 ITIH3Q06033 890 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC13A2Q13183 592 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 MPP3Q13368 585 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 FHL2Q14192 279 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 NBPF8Q3BBV2 869 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 CD300EQ496F6 205 aaPredicted RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 TEDDM1Q5T9Z0 273 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 LAIR1Q6GTX8 287 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 CCSAPQ6IQ19 270 aaPredicted RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PPP1R32Q7Z5V6 425 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 MRGPRGQ86SM5 289 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 ADGRG5Q8IZF4 528 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 LNX2Q8N448 690 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 Q8NA96 180 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 IL31RAQ8NI17 732 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 ANKS1AQ92625 1134 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 APIPQ96GX9 242 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 PGBD1Q96JS3 809 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 MLST8Q9BVC4 326 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZNF518BQ9C0D4 1074 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZNF287Q9HBT7 754 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 LRIT1Q9P2V4 623 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 XPR1Q9UBH6 696 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 HESX1Q9UBX0 185 aa3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 DDX20Q9UHI6 824 aaKnown RBP3.31□□□□□ -1.88
RNU6-428P-201ENST00000362942 MBD3L4A6NDZ8 208 aaPredicted RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MBD3L3A6NE82 208 aaPredicted RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 PLIN1O60240 522 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 DNAJB5O75953 348 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MAP4K4O95819 1239 aaPredicted RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MYL1P05976 194 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 NBPF7P0C2Y1 421 aaPredicted RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MYF5P13349 255 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZFP36P26651 326 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 CD6P30203 668 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 PXNP49023 591 aaPredicted RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 DPTQ07507 201 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 E2F2Q14209 437 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 SF3B3Q15393 1217 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 SAFBQ15424 915 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 CNGA2Q16280 664 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MGAT5BQ3V5L5 792 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 ICE2Q659A1 982 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 TAF2Q6P1X5 1199 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 APOA5Q6Q788 366 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 GPR149Q86SP6 731 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 FAM9AQ8IZU1 332 aaPredicted RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 Q8N1X5 172 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 MPP5Q8N3R9 675 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC16A11Q8NCK7 471 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 NSUN7Q8NE18 718 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 SSH3Q8TE77 659 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 ASB10Q8WXI3 467 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 LARP4BQ92615 738 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 NACC2Q96BF6 587 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 NMD3Q96D46 503 aaKnown RBP3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 Q96MF0 132 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC46A1Q96NT5 459 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 AIFM2Q9BRQ8 373 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 ALG8Q9BVK2 526 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 C22orf23Q9BZE7 217 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 DPH1Q9BZG8 443 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 TPSD1Q9BZJ3 242 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 TTYH3Q9C0H2 523 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 BTBD1Q9H0C5 482 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 TMPRSS5Q9H3S3 457 aa3.3□□□□□ -1.88
RNU6-428P-201ENST00000362942 TOR3AQ9H497 397 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms