RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NPC1O15118 1278 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 CCP110O43303 1012 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 RASSF9O75901 435 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 INMTO95050 263 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 CFPP27918 469 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 GABRB3P28472 473 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 CCT5P48643 541 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 PPM1FP49593 454 aaPredicted RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 TOB1P50616 345 aaPredicted RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 RENBPP51606 427 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 RABGGTBP53611 331 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 COPAP53621 1224 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 PIGFQ07326 219 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 GALNT1Q10472 559 aaPredicted RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC29A2Q14542 456 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF124Q15973 351 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 PFKFB4Q16877 469 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 FAM102AQ5T9C2 384 aaPredicted RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 AGAP9Q5VTM2 703 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZDHHC24Q6UX98 284 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 POLNQ7Z5Q5 900 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF354CQ86Y25 554 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 C1QL4Q86Z23 238 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 RHOT2Q8IXI1 618 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 LRRC56Q8IYG6 542 aaPredicted RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 C18orf8Q96DM3 657 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 RMDN3Q96TC7 470 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 MAGEB5Q9BZ81 275 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 REXO4Q9GZR2 422 aaKnown RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 MYLK2Q9H1R3 596 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 TMEM8AQ9HCN3 771 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 TBC1D23Q9NUY8 699 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 MRPS18AQ9NVS2 196 aaKnown RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZFR2Q9UPR6 939 aaKnown RBP4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 PCDHGB3Q9Y5G1 929 aa4.47□□□□□ -1.69
RNU6-28P-201ENST00000362378 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 FAM234BA2RU67 622 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 NPEPPSL1A6NEC2 478 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 POLRMTO00411 1230 aaKnown RBP4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 DCLK1O15075 740 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 FOXS1O43638 330 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 PPFIA4O75335 1185 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 PLATP00750 562 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 HSD3B1P14060 373 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 HK1P19367 917 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 ACVR2AP27037 513 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 CNR2P34972 360 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 POU5F1BQ06416 359 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 FOXO1Q12778 655 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 BOP1Q14137 746 aaKnown RBP4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 PTK2BQ14289 1009 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 IQCB1Q15051 598 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 NPY5RQ15761 445 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 RAB30Q15771 203 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZFYVE27Q5T4F4 411 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 RRAGBQ5VZM2 374 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 SPTY2D1Q68D10 685 aaPredicted RBP4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 USP17L6PQ6QN14 398 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 KRT73Q86Y46 540 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 MB21D1Q8N884 522 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 GLIS1Q8NBF1 620 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 POC1BQ8TC44 478 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 TRAPPC12Q8WVT3 735 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 MUL1Q969V5 352 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 LRRC46Q96FV0 321 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 MARS2Q96GW9 593 aaKnown RBP4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 LRIG1Q96JA1 1093 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 SNX27Q96L92 541 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 KCNC2Q96PR1 638 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 PPP1R9BQ96SB3 815 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 PNKPQ96T60 521 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 NEU1Q99519 415 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 SMOQ99835 787 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 UBA5Q9GZZ9 404 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 OBP2BQ9NPH6 170 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 CASS4Q9NQ75 786 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 RGL1Q9NZL6 768 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 VSX1Q9NZR4 365 aaPredicted RBP4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 DKK4Q9UBT3 224 aa4.46□□□□□ -1.7
RNU6-28P-201ENST00000362378 LGALS16A8MUM7 142 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 DIRC3C9JPN6 131 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 E7ENX8 843 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 LEFTY2O00292 366 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 SYT5O00445 386 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 PODXLO00592 558 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 NPHP1O15259 732 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 GPR42O15529 346 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 NDST3O95803 873 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 C8AP07357 584 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 ATXN1LP0C7T5 689 aaKnown RBP4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 VEGFAP15692 232 aaPredicted RBP4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 SERPINF1P36955 418 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 CPT1AP50416 773 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 NHLH2Q02577 135 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 TAP2Q03519 686 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 ZNF844Q08AG5 666 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 GRM1Q13255 1194 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 BIRC3Q13489 604 aa4.45□□□□□ -1.7
RNU6-28P-201ENST00000362378 ARHGEF7Q14155 803 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms