RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ARHGAP20Q9P2F6 1191 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■■■ 67.6
SNX6-201ENST00000362031 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 A8MXQ7 604 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 P4HA1P13674 534 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 CHRNB2P17787 502 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 RFX1P22670 979 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 HNRNPH3P31942 346 aaKnown RBP11.48□□□□□ -0.57
SNX6-201ENST00000362031 STAT1P42224 750 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 TRIM14Q14142 442 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 SFMBT2Q5VUG0 894 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 OVOS1Q6IE37 1185 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 ENOSF1Q7L5Y1 443 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 DPH6Q7L8W6 267 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 ZNF571Q7Z3V5 609 aaPredicted RBP11.48□□□□□ -0.57
SNX6-201ENST00000362031 LNX1Q8TBB1 728 aaPredicted RBP11.48□□□□□ -0.57
SNX6-201ENST00000362031 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 SYT11Q9BT88 431 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 NOCTQ9UK39 431 aaKnown RBP11.48□□□□□ -0.57
SNX6-201ENST00000362031 PCDHB12Q9Y5F1 795 aa11.48□□□□□ -0.57
SNX6-201ENST00000362031 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
SNX6-201ENST00000362031 GRM6O15303 877 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TBC1D4O60343 1298 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 OAZ2O95190 189 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 CYP11B1P15538 503 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TYMPP19971 482 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 BRD2P25440 801 aaKnown RBP11.47□□□□□ -0.57
SNX6-201ENST00000362031 DNAJB2P25686 324 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 ERVFC1P60507 584 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 PTK2Q05397 1052 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 MTF1Q14872 753 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 MEA1Q16626 185 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 CNGA4Q8IV77 575 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 VPS52Q8N1B4 723 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 SPPL3Q8TCT6 385 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 EPS8L1Q8TE68 723 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TMEM169Q96HH4 297 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TMEM176AQ96HP8 235 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 PKMYT1Q99640 499 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TTPALQ9BTX7 342 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 RHOBTB2Q9BYZ6 727 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 SNX25Q9H3E2 840 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 HAUS4Q9H6D7 363 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 FAM49BQ9NUQ9 324 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 RFXAPO00287 272 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TRAPPC3O43617 180 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 SOD2P04179 222 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 IRS1P35568 1242 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 PLCB3Q01970 1234 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
SNX6-201ENST00000362031 CCDC173Q0VFZ6 552 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 PAQR9Q6ZVX9 377 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 DDX53Q86TM3 631 aaKnown RBP11.47□□□□□ -0.57
SNX6-201ENST00000362031 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 TMEM86AQ8N2M4 240 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 RIN2Q8WYP3 895 aaPredicted RBP11.47□□□□□ -0.57
SNX6-201ENST00000362031 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
SNX6-201ENST00000362031 PCDHB18PQ96TA0 734 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 NT5C1AQ9BXI3 368 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
SNX6-201ENST00000362031 SOWAHDA6NJG2 315 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 C5orf67F2Z3F1 127 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 CLDN5O00501 218 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 SYN3O14994 580 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 LILRB3O75022 631 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 VNN2O95498 520 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 MMEP08473 750 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 CCDC130P13994 396 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 ERVK-21P61565 698 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 ASIC2Q16515 512 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 USP41Q3LFD5 358 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 PPP1R26Q5T8A7 1209 aaPredicted RBP11.46□□□□□ -0.57
SNX6-201ENST00000362031 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.46□□□□□ -0.57
SNX6-201ENST00000362031 GLYCTKQ8IVS8 523 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 CRYBG2Q8N1P7 616 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 B3GALNT2Q8NCR0 500 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 ZNF397Q8NF99 534 aaPredicted RBP11.46□□□□□ -0.57
SNX6-201ENST00000362031 ZNF606Q8WXB4 792 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 SYN2Q92777 582 aaPredicted RBP11.46□□□□□ -0.57
SNX6-201ENST00000362031 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
SNX6-201ENST00000362031 PANX2Q96RD6 677 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 MYO6Q9UM54 1294 aa11.46□□□□□ -0.57
SNX6-201ENST00000362031 HIDE1A8MVS5 230 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 SOX1O00570 391 aaPredicted RBP11.45□□□□□ -0.58
SNX6-201ENST00000362031 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
SNX6-201ENST00000362031 FECHP22830 423 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 GNA15P30679 374 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 CACNA2D1P54289 1103 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 CCZ1BP86790 482 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 CCZ1P86791 482 aaPredicted RBP11.45□□□□□ -0.58
SNX6-201ENST00000362031 FMO1Q01740 532 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 DSG1Q02413 1049 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
SNX6-201ENST00000362031 MDH1BQ5I0G3 518 aa11.45□□□□□ -0.58
SNX6-201ENST00000362031 RAD9BQ6WBX8 426 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms