RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 ZNF365Q70YC5 407 aa19.18■□□□□ 0.66
CCDC7-203ENST00000362006 C16orf59Q7L2K0 433 aa19.18■□□□□ 0.66
CCDC7-203ENST00000362006 TFAP2BQ92481 460 aa19.18■□□□□ 0.66
CCDC7-203ENST00000362006 RABGGTAQ92696 567 aa19.18■□□□□ 0.66
CCDC7-203ENST00000362006 ZNF689Q96CS4 500 aaPredicted RBP19.18■□□□□ 0.66
CCDC7-203ENST00000362006 LHX5Q9H2C1 402 aa19.18■□□□□ 0.66
CCDC7-203ENST00000362006 LZTFL1Q9NQ48 299 aa19.18■□□□□ 0.66
CCDC7-203ENST00000362006 ANKRD62A6NC57 917 aa19.17■□□□□ 0.66
CCDC7-203ENST00000362006 BTNL10A8MVZ5 291 aa19.17■□□□□ 0.66
CCDC7-203ENST00000362006 B4GALT3O60512 393 aa19.17■□□□□ 0.66
CCDC7-203ENST00000362006 UNGP13051 313 aaPredicted RBP19.17■□□□□ 0.66
CCDC7-203ENST00000362006 ELAVL2Q12926 359 aaKnown RBP19.17■□□□□ 0.66
CCDC7-203ENST00000362006 PTPN14Q15678 1187 aa19.17■□□□□ 0.66
CCDC7-203ENST00000362006 OTOP2Q7RTS6 562 aa19.17■□□□□ 0.66
CCDC7-203ENST00000362006 CMTR2Q8IYT2 770 aaKnown RBP19.17■□□□□ 0.66
CCDC7-203ENST00000362006 TMEM35BQ8NCS4 154 aa19.17■□□□□ 0.66
CCDC7-203ENST00000362006 CAPN15O75808 1086 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 CALCAP01258 141 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 FTLP02792 175 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 PCSK1P29120 753 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 ARHGAP25P42331 645 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 BRCC3P46736 316 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 DEFB103AP81534 67 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 ACOT1Q86TX2 421 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 PALB2Q86YC2 1186 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 TRIM11Q96F44 468 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 LBHD1Q9BQE6 289 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 GALTP07902 379 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 TMEM253P0C7T8 217 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 CDH5P33151 784 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 GALCP54803 685 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 CENPCQ03188 943 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 PAN2Q504Q3 1202 aaKnown RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 ARHGAP17Q68EM7 881 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 LCLAT1Q6UWP7 414 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 THEM5Q8N1Q8 247 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 CTNNBL1Q8WYA6 563 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 CYFIP2Q96F07 1278 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 ZSWIM1Q9BR11 485 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 LACRTQ9GZZ8 138 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 DDX43Q9NXZ2 648 aaKnown RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 MYO1AQ9UBC5 1043 aa19.16■□□□□ 0.66
CCDC7-203ENST00000362006 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 PRG3Q9Y2Y8 225 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-203ENST00000362006 ZBBXA8MT70 800 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 TMCO5BA8MYB1 307 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 O00370 1275 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 SYN3O14994 580 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 PDGFRBP09619 1106 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 NSFP46459 744 aaKnown RBP19.15■□□□□ 0.66
CCDC7-203ENST00000362006 SLC11A1P49279 550 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 ALDH7A1P49419 539 aaKnown RBP19.15■□□□□ 0.66
CCDC7-203ENST00000362006 NOMO3P69849 1222 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 TMEM240Q5SV17 173 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 NYAP1Q6ZVC0 841 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 OSTM1Q86WC4 334 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 RNF10Q8N5U6 811 aaKnown RBP19.15■□□□□ 0.66
CCDC7-203ENST00000362006 HASPINQ8TF76 798 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 DPF3Q92784 378 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 VCPIP1Q96JH7 1222 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 MTIF3Q9H2K0 278 aaKnown RBP19.15■□□□□ 0.66
CCDC7-203ENST00000362006 RC3H2Q9HBD1 1191 aaKnown RBP19.15■□□□□ 0.66
CCDC7-203ENST00000362006 CDH9Q9ULB4 789 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 RCCD1A6NED2 376 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 KIF5CO60282 957 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 LMO2P25791 158 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 ORC1Q13415 861 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 HERVK_113Q902F9 699 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 CALR3Q96L12 384 aaKnown RBP19.15■□□□□ 0.66
CCDC7-203ENST00000362006 ACBD6Q9BR61 282 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 TAS2R14Q9NYV8 317 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 GUCA1BQ9UMX6 200 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 NME7Q9Y5B8 376 aa19.15■□□□□ 0.66
CCDC7-203ENST00000362006 A0A0A6YYK5 440 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-203ENST00000362006 ITGB1P05556 798 aa19.14■□□□□ 0.65
CCDC7-203ENST00000362006 MYBL1P10243 752 aa19.14■□□□□ 0.65
CCDC7-203ENST00000362006 BCAR1P56945 870 aa19.14■□□□□ 0.65
CCDC7-203ENST00000362006 COL13A1Q5TAT6 717 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-203ENST00000362006 PHF13Q86YI8 300 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-203ENST00000362006 B3GALNT2Q8NCR0 500 aa19.14■□□□□ 0.65
CCDC7-203ENST00000362006 CWH43Q9H720 699 aa19.14■□□□□ 0.65
CCDC7-203ENST00000362006 HESX1Q9UBX0 185 aa19.14■□□□□ 0.65
CCDC7-203ENST00000362006 SF3B1O75533 1304 aaKnown RBP eCLIP19.14■□□□□ 0.654e-12■■■■■ 275.7
CCDC7-203ENST00000362006 PTPN1P18031 435 aaKnown RBP19.13■□□□□ 0.65
CCDC7-203ENST00000362006 GPC5P78333 572 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 BTG3Q14201 252 aaPredicted RBP19.13■□□□□ 0.65
CCDC7-203ENST00000362006 IFI16Q16666 785 aaKnown RBP19.13■□□□□ 0.65
CCDC7-203ENST00000362006 NAA35Q5VZE5 725 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 OVOS1Q6IE37 1185 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 MSANTD4Q8NCY6 345 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 PHOSPHO2Q8TCD6 241 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCDC7-203ENST00000362006 PACSIN1Q9BY11 444 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 TIMM13Q9Y5L4 95 aaPredicted RBP19.13■□□□□ 0.65
CCDC7-203ENST00000362006 CCDC85CA6NKD9 419 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 I3L4J1 428 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 MICAL2O94851 1124 aa19.13■□□□□ 0.65
CCDC7-203ENST00000362006 CFHP08603 1231 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms