RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-202ENST00000359526 H7C4K7 107 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 PSTPIP1O43586 416 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 PDGFRAP16234 1089 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-202ENST00000359526 ERFP50548 548 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.37
DNMT1-202ENST00000359526 CYLC2Q14093 348 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-202ENST00000359526 ANGPTL8Q6UXH0 198 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 SLC13A5Q86YT5 568 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-202ENST00000359526 ACTRT1Q8TDG2 376 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.37
DNMT1-202ENST00000359526 PNKPQ96T60 521 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 IL25Q9H293 177 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 MANSC1Q9H8J5 431 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 VTA1Q9NP79 307 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 RAB6BQ9NRW1 208 aa12.77□□□□□ -0.37
DNMT1-202ENST00000359526 A0A0A6YYK5 440 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 ARHGEF9O43307 516 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 MAPTP10636 758 aaKnown RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 ACADSP16219 412 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 SERPINB3P29508 390 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 NNMTP40261 264 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 ACADSBP45954 432 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 GEMIN4P57678 1058 aaKnown RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 TPI1P60174 286 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 MAP3K10Q02779 954 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 NME3Q13232 169 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 KYNUQ16719 465 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 SV2CQ496J9 727 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 FAM43BQ6ZT52 329 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 CASKIN2Q8WXE0 1202 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 CDY2AQ9Y6F7 541 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 CDY1Q9Y6F8 540 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 RAB27AP51159 221 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 MAPK7Q13164 816 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 PPIL2Q13356 520 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 CYTH1Q15438 398 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 DDIASQ8IXT1 998 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 C4orf33Q8N1A6 199 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 KIF2BQ8N4N8 673 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 PLEKHA5Q9HAU0 1116 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 HACD3Q9P035 362 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 DUOX1Q9NRD9 1551 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 EXTL3O43909 919 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 WEE2P0C1S8 567 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 SLC29A2Q14542 456 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 WDR72Q3MJ13 1102 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 OR6P1Q8NGX9 317 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 TMBIM4Q9HC24 238 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 O00370 1275 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 HADHAP40939 763 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 KLK7P49862 253 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 CCDC15Q0P6D6 951 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 PCYOX1LQ8NBM8 494 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 FEZF2Q8TBJ5 459 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 CAVIN3Q969G5 261 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 HIC2Q96JB3 615 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 MCEEQ96PE7 176 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 RTFDC1Q9BY42 306 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 DDX28Q9NUL7 540 aaKnown RBP12.76□□□□□ -0.37
DNMT1-202ENST00000359526 IGSF9BQ9UPX0 1349 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 ATRNO75882 1429 aa12.76□□□□□ -0.37
DNMT1-202ENST00000359526 GOLGA8RI6L899 631 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 GPR182O15218 404 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 APRTP07741 180 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 VHLP40337 213 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 HSPA13P48723 471 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 BTBD8Q5XKL5 378 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 C3orf62Q6ZUJ4 267 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 RNF149Q8NC42 400 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 CCDC90BQ9GZT6 254 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 WHRNQ9P202 907 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 NAGPAQ9UK23 515 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
DNMT1-202ENST00000359526 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
DNMT1-202ENST00000359526 SULT1E1P49888 294 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 ANO4Q32M45 955 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 ACAD10Q6JQN1 1059 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 LRRC8BQ6P9F7 803 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 MRC1P22897 1456 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 C17orf102A2RUQ5 167 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 MTSS1O43312 755 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 HNRNPRO43390 633 aaKnown RBP12.75□□□□□ -0.37
DNMT1-202ENST00000359526 CDH2P19022 906 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-202ENST00000359526 RBBP7Q16576 425 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 Q4G0T1 1027 aa12.75□□□□□ -0.37
DNMT1-202ENST00000359526 RNF219Q5W0B1 726 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-202ENST00000359526 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms