RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 CCDC137Q6PK04 289 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ENOSF1Q7L5Y1 443 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 DPP10Q8N608 796 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SH3GL3Q99963 347 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 TMEM260Q9NX78 707 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 CPDO75976 1380 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 E9PBE3 544 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 CAND2O75155 1236 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 RRM2P31350 389 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 GRK3P35626 688 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 NLRP11P59045 1033 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 NAA30Q147X3 362 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SPIRE2Q8WWL2 714 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SPACA7Q96KW9 195 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 EXO5Q9H790 373 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SLC38A7Q9NVC3 462 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 CNOT7Q9UIV1 285 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 POLR1DQ9Y2S0 133 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SNTNA6NMZ2 147 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 STXBP3O00186 592 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 KRT75O95678 551 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 ALDH7A1P49419 539 aaKnown RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 PPP2R2AP63151 447 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 CALML6Q8TD86 181 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 EME1Q96AY2 570 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 WNK4Q96J92 1243 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 FAM20AQ96MK3 541 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 ADI1Q9BV57 179 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 NMRK1Q9NWW6 199 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 TRIM49BA6NDI0 452 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 MFAP3LO75121 409 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 POTEIP0CG38 1075 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 JAK1P23458 1154 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 HMGCS2P54868 508 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 CSTF3Q12996 717 aaKnown RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 LAMC2Q13753 1193 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 P3H1Q32P28 736 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 SLC25A24Q6NUK1 477 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 REXO4Q9GZR2 422 aaKnown RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 FBXL21Q9UKT6 434 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 N6AMT1Q9Y5N5 214 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 KIF13AQ9H1H9 1805 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 LRRC14BA6NHZ5 514 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 PTPN7P35236 360 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 PLOD1Q02809 727 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 NFIXQ14938 502 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 SV2CQ496J9 727 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 PRUNE1Q86TP1 453 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 MICU2Q8IYU8 434 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 PPP1R2P1Q96PQ5 205 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 JPH1Q9HDC5 661 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 NAGPAQ9UK23 515 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 GH1P01241 217 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 IFNAR1P17181 557 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 CDC27P30260 824 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 POLD3Q15054 466 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 UGT3A1Q6NUS8 523 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 PROM2Q8N271 834 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 CCT7Q99832 543 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 ADAM21Q9UKJ8 722 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 EMSYQ7Z589 1322 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 NEURL4Q96JN8 1562 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 POLRMTO00411 1230 aaKnown RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 ZW10O43264 779 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 NCK2O43639 380 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 APRTP07741 180 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 ENO2P09104 434 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 VSNL1P62760 191 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 INAQ16352 499 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 MIER2Q8N344 545 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 MAGED4Q96JG8 741 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 SLITRK1Q96PX8 696 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 MYLK2Q9H1R3 596 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 MFSD1Q9H3U5 465 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 OSGEPL1Q9H4B0 414 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 AKAP7Q9P0M2 348 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-202ENST00000358808 NDOR1Q9UHB4 597 aa10.61□□□□□ -0.71
CLIP1-202ENST00000358808 GSTM1P09488 218 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 HIRAP54198 1017 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-202ENST00000358808 LRRC36Q1X8D7 754 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 GSPT2Q8IYD1 628 aaKnown RBP10.6□□□□□ -0.71
CLIP1-202ENST00000358808 KIRREL3Q8IZU9 778 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 GALNT4Q8N4A0 578 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 MOSPD2Q8NHP6 518 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 C18orf8Q96DM3 657 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 TMEM47Q9BQJ4 181 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 PCMTD2Q9NV79 361 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 LIMA1Q9UHB6 759 aaKnown RBP10.6□□□□□ -0.71
CLIP1-202ENST00000358808 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
CLIP1-202ENST00000358808 ARHGAP23Q9P227 1491 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms