RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 NRDE2Q9H7Z3 1164 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 PCDHGC3Q9UN70 934 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 MACROD2A1Z1Q3 448 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 HOXA2O43364 376 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 GNL1P36915 607 aaPredicted RBP19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 BRCC3P46736 316 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 NOMO3P69849 1222 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 NAA35Q5VZE5 725 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 ACAD10Q6JQN1 1059 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 TRIM72Q6ZMU5 477 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 ACOT1Q86TX2 421 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 SLC35F6Q8N357 371 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 CPA5Q8WXQ8 436 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 LPIN3Q9BQK8 851 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 STXBP5LQ9Y2K9 1186 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 TBKBP1A7MCY6 615 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 A8MXQ7 604 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 GABRDO14764 452 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 UPP2O95045 317 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 PDGFRBP09619 1106 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 FAM163BP0C2L3 166 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 TMEM253P0C7T8 217 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 VDRP11473 427 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 ABCB4P21439 1286 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 CENPCQ03188 943 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 DENND1BQ6P3S1 775 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 DSTYKQ6XUX3 929 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 C16orf59Q7L2K0 433 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 C12orf29Q8N999 325 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 TRIM58Q8NG06 486 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 ARHGEF26Q96DR7 871 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 THAP2Q9H0W7 228 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 PDCL3Q9H2J4 239 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 SNX25Q9H3E2 840 aa19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 TIMM13Q9Y5L4 95 aaPredicted RBP19.29■□□□□ 0.68
SMARCD3-202ENST00000356800 A0A0A6YYK5 440 aaPredicted RBP19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 ANKRD62A6NC57 917 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 M0QZQ0 153 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 O00370 1275 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 DEFB103AP81534 67 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 CRYBG2Q8N1P7 616 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 WDTC1Q8N5D0 677 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 RSPH1Q8WYR4 309 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 NOX5Q96PH1 765 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 FAM193BQ96PV7 902 aaPredicted RBP19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 L2HGDHQ9H9P8 463 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 IL23AQ9NPF7 189 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 KIAA1257Q9ULG3 409 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 NCANO14594 1321 aa19.28■□□□□ 0.68
SMARCD3-202ENST00000356800 CTAGE9A4FU28 777 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 TMEM189-UBE2V1I3L0A0 370 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 MED7O43513 233 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 DGKIO75912 1065 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 MOCS3O95396 460 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 PFKMP08237 780 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 CDH5P33151 784 aaPredicted RBP19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 OR1G1P47890 313 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 TERF1P54274 439 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 WDR5P61964 334 aaKnown RBP19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 CNGA2Q16280 664 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 SGO2Q562F6 1265 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 TMCO2Q7Z6W1 182 aaPredicted RBP19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 C7orf61Q8IZ16 206 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 TMEM86AQ8N2M4 240 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 TOP1MTQ969P6 601 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 SUSD3Q96L08 255 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 NAPGQ99747 312 aaPredicted RBP19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 PRG3Q9Y2Y8 225 aaPredicted RBP19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 VWA8A3KMH1 1905 aa19.27■□□□□ 0.68
SMARCD3-202ENST00000356800 MICAL2O94851 1124 aa19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 LSM8O95777 96 aaKnown RBP19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 PAX3P23760 479 aa19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 C1orf131Q8NDD1 294 aaKnown RBP19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 CTNNBL1Q8WYA6 563 aaPredicted RBP19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 BADQ92934 168 aa19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 MRPL9Q9BYD2 267 aaKnown RBP19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 CAPN6Q9Y6Q1 641 aa19.27■□□□□ 0.67
SMARCD3-202ENST00000356800 NRP1O14786 923 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 BUB1O43683 1085 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 ATP2C2O75185 946 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 CYP11A1P05108 521 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 ODC1P11926 461 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 ACAT1P24752 427 aaKnown RBP19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 SLC11A1P49279 550 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 CCDC142Q17RM4 750 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 PPP1R26Q5T8A7 1209 aaPredicted RBP19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 KIAA0319Q5VV43 1072 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 LCLAT1Q6UWP7 414 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 MON1BQ7L1V2 547 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 PHF13Q86YI8 300 aaPredicted RBP19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 MCOLN2Q8IZK6 566 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 ALS2CR12Q96Q35 445 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 RTP3Q9BQQ7 232 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 LHX5Q9H2C1 402 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 FAM49BQ9NUQ9 324 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 CYTH4Q9UIA0 394 aa19.26■□□□□ 0.67
SMARCD3-202ENST00000356800 ATMINO43313 823 aaPredicted RBP19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 AMHP03971 560 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms