RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CRYBG2Q8N1P7 616 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 C1orf131Q8NDD1 294 aaKnown RBP18.26■□□□□ 0.51
VPS13B-201ENST00000355155 STK32AQ8WU08 396 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 KRT35Q92764 455 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 NT5C1AQ9BXI3 368 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 CYLDQ9NQC7 956 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 MYO1FO00160 1098 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 GPD2P43304 727 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 RWDD2BP57060 319 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 NNTQ13423 1086 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 C8orf74Q6P047 294 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 ARRDC4Q8NCT1 418 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 SPATA18Q8TC71 538 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 AENQ8WTP8 325 aaKnown RBP18.26■□□□□ 0.51
VPS13B-201ENST00000355155 MCRS1Q96EZ8 462 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 DDX27Q96GQ7 796 aaKnown RBP18.26■□□□□ 0.51
VPS13B-201ENST00000355155 RUNDC3BQ96NL0 473 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 VIPAS39Q9H9C1 493 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 TSC2P49815 1807 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 SIGLEC16A6NMB1 481 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 PTGESO14684 152 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 MICAL2O94851 1124 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 ELNP15502 786 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 PTPN7P35236 360 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 NDST1P52848 882 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 ACLYP53396 1101 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 HACE1Q8IYU2 909 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 TOP6BLQ8N6T0 577 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 PPP1R13LQ8WUF5 828 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 FAM105AQ9NUU6 356 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 SLC38A7Q9NVC3 462 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 HMGXB4Q9UGU5 601 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 FSCN2O14926 492 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 SGO2Q562F6 1265 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 ERICH1Q86X53 443 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 KATNAL2Q8IYT4 538 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 C18orf25Q96B23 403 aaPredicted RBP18.25■□□□□ 0.51
VPS13B-201ENST00000355155 MIS12Q9H081 205 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 OGFRQ9NZT2 677 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 CYTH4Q9UIA0 394 aa18.25■□□□□ 0.51
VPS13B-201ENST00000355155 WARSP23381 471 aaKnown RBP18.24■□□□□ 0.51
VPS13B-201ENST00000355155 ITGA7Q13683 1181 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 ACAP1Q15027 740 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 SIX1Q15475 284 aaPredicted RBP18.24■□□□□ 0.51
VPS13B-201ENST00000355155 PTGISQ16647 500 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 SV2CQ496J9 727 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 PTPN20Q4JDL3 420 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 TRAF7Q6Q0C0 670 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 PASD1Q8IV76 773 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.24■□□□□ 0.51
VPS13B-201ENST00000355155 SLCO2A1Q92959 643 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 CAVIN3Q969G5 261 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 DMGDHQ9UI17 866 aaKnown RBP18.24■□□□□ 0.51
VPS13B-201ENST00000355155 GINS2Q9Y248 185 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 HES2Q9Y543 173 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 NME7Q9Y5B8 376 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 COL4A4P53420 1690 aaPredicted RBP18.24■□□□□ 0.51
VPS13B-201ENST00000355155 FKTNO75072 461 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 SCNN1AP37088 669 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 PIGHQ14442 188 aaPredicted RBP18.24■□□□□ 0.51
VPS13B-201ENST00000355155 TMEM130Q8N3G9 435 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 GSTCDQ8NEC7 633 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 PHF24Q9UPV7 400 aa18.24■□□□□ 0.51
VPS13B-201ENST00000355155 PPEF2O14830 753 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 PFKMP08237 780 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 SKIP12755 728 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 SOWAHAQ2M3V2 549 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 KBTBD7Q8WVZ9 684 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 BTBD6Q96KE9 485 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 PCYOX1Q9UHG3 505 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 AKAP5P24588 427 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 MARCKSL1P49006 195 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 VEGFBP49765 207 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 TAF6P49848 677 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 ZNF252P-AS1Q0IIN9 211 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 SEL1L2Q5TEA6 688 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 XYLT1Q86Y38 959 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 MAIP1Q8WWC4 291 aa18.23■□□□□ 0.51
VPS13B-201ENST00000355155 FAM187AA6NFU0 413 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 KRIT1O00522 736 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 SPOPO43791 374 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 FGGP02679 453 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 AARSP49588 968 aaKnown RBP eCLIP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 SOX4Q06945 474 aaPredicted RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 DHX34Q14147 1143 aaKnown RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 ARCQ7LC44 396 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 SLC13A5Q86YT5 568 aaPredicted RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 RHOT1Q8IXI2 618 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 IFT20Q8IY31 132 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 HDAC7Q8WUI4 952 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 MRPL45Q9BRJ2 306 aaKnown RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 UBN1Q9NPG3 1134 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 KPNA7A9QM74 516 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 TRPA1O75762 1119 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 PYGMP11217 842 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 DNAJC24Q6P3W2 148 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms