RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 NBPF15Q8N660 670 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 GPRC5AQ8NFJ5 357 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 TMEM169Q96HH4 297 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 MIR1-1HGQ9H1L0 117 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 WDCPQ9H6R7 721 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 SH3GLB2Q9NR46 395 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 BARHL2Q9NY43 387 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 PSD3Q9NYI0 1048 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 FHOD1Q9Y613 1164 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.42□□□□□ -0.74
COL11A1-201ENST00000353414 CPT1AP50416 773 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 ATP12AP54707 1039 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 POU4F1Q01851 419 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 ZNF177Q13360 481 aaPredicted RBP10.42□□□□□ -0.74
COL11A1-201ENST00000353414 EMC2Q15006 297 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 SH3BP5LQ7L8J4 393 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL11A1-201ENST00000353414 TMEM245Q9H330 911 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 KRT84Q9NSB2 600 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 RNF112Q9ULX5 631 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 FAM135BQ49AJ0 1406 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 PLEKHG1Q9ULL1 1385 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 PGM1P36871 562 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 FAM71DQ8N9W8 422 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 PANX2Q96RD6 677 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 APOL2Q9BQE5 337 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 FAM129AQ9BZQ8 928 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 SENP2Q9HC62 589 aa10.42□□□□□ -0.74
COL11A1-201ENST00000353414 ABCA8O94911 1581 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 B3GAT3O94766 335 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 PNMA6AP0CW24 399 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 HDAC4P56524 1084 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 SREBF2Q12772 1141 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 CAMK2GQ13555 558 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 AKIRIN2Q53H80 203 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 FBXO16Q8IX29 292 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 THTPAQ9BU02 230 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 STN1Q9H668 368 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 ETNK1Q9HBU6 452 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 ARHGEF3Q9NR81 526 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 RRN3P2A6NIE6 340 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 FAM47E-STBD1D6RA91 191 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 RGS5O15539 181 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 KRT75O95678 551 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 KLRC2P26717 231 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 GUCY1A3Q02108 690 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 SV2CQ496J9 727 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 MIIPQ5JXC2 388 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 C16orf59Q7L2K0 433 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 C16orf62Q7Z3J2 963 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 WNT8AQ9H1J5 351 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 GOLPH3Q9H4A6 298 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 PIH1D1Q9NWS0 290 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 TFR2Q9UP52 801 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 CDYLQ9Y232 598 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 H2AFYO75367 372 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 CHGBP05060 677 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 CSF1RP07333 972 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 TCF7P36402 384 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 PRIM2P49643 509 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 ZNF438Q7Z4V0 828 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 SRBD1Q8N5C6 995 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 SEMA4DQ92854 862 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 MED15Q96RN5 788 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 ZC3H7BQ9UGR2 993 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 M0QYT0 321 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 KLHL18O94889 574 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 DSG3P32926 999 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 CLK2P49760 499 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 EIF3BP55884 814 aaKnown RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 EFEMP1Q12805 493 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 MTF1Q14872 753 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 RPRD1AQ96P16 312 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-201ENST00000353414 KATNA1O75449 491 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 EGFRP00533 1210 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 DPEP1P16444 411 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 GRM4Q14833 912 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 CEP55Q53EZ4 464 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 LONP2Q86WA8 852 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 HEATR4Q86WZ0 1026 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 ZSWIM2Q8NEG5 633 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 FBXO32Q969P5 355 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 MTERF3Q96E29 417 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 HPDLQ96IR7 371 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 TRPC4Q9UBN4 977 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 ATP6V1HQ9UI12 483 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 PZPP20742 1482 aa10.41□□□□□ -0.74
COL11A1-201ENST00000353414 FAM205CA6NFA0 338 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 NFIBO00712 420 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 DPYDQ12882 1025 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 TOB2Q14106 344 aaPredicted RBP10.4□□□□□ -0.74
COL11A1-201ENST00000353414 GPAT2Q6NUI2 795 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 TMEM154Q6P9G4 183 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 OR2W6PQ8NHA6 318 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 REEP2Q9BRK0 252 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 SMPD4Q9NXE4 827 aa10.4□□□□□ -0.74
COL11A1-201ENST00000353414 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms