RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 VSIG1Q86XK7 387 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 AGGF1Q8N302 714 aaeCLIP25.86■■□□□ 1.73
CPNE1-202ENST00000352393 LRRC8CQ8TDW0 803 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 LRRC37BQ96QE4 947 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 MSTO1Q9BUK6 570 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 ADGRA2Q96PE1 1338 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 A0A0B4J269 797 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 DCTN3O75935 186 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 LDHAP00338 332 aaKnown RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 CA4P22748 312 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 CDKN2BP42772 138 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 CCNG1P51959 295 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 NCOA4Q13772 614 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 TFDP3Q5H9I0 405 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 DNAJC24Q6P3W2 148 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 CAPN12Q6ZSI9 719 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 INPP5DQ92835 1189 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 SSU72Q9NP77 194 aaKnown RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 SLC5A4Q9NY91 659 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 SCAF8Q9UPN6 1271 aaKnown RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 LSM8O95777 96 aaKnown RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 ATP2A2P16615 1042 aaKnown RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 GLRA2P23416 452 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 NAMPTP43490 491 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 PDIA2Q13087 525 aaKnown RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 NAA25Q14CX7 972 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 PPP1R15BQ5SWA1 713 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 TMEM143Q96AN5 459 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 TEPSINQ96N21 525 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 TMEM237Q96Q45 408 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 PORCNQ9H237 461 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 GINM1Q9NU53 330 aa25.85■■□□□ 1.73
CPNE1-202ENST00000352393 FARP1Q9Y4F1 1045 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-202ENST00000352393 PHIPQ8WWQ0 1821 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 EDN1P05305 212 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 SUPT20HL2P0C7V6 817 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 SUPT20HL1Q3ZLR7 823 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 SCARA3Q6AZY7 606 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 RTKN2Q8IZC4 609 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 SLC35B2Q8TB61 432 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 NSUN6Q8TEA1 469 aaKnown RBP25.84■■□□□ 1.73
CPNE1-202ENST00000352393 HAUS1Q96CS2 278 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 TARS2Q9BW92 718 aaKnown RBP25.84■■□□□ 1.73
CPNE1-202ENST00000352393 MAK16Q9BXY0 300 aaKnown RBP25.84■■□□□ 1.73
CPNE1-202ENST00000352393 CYLDQ9NQC7 956 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 BATF3Q9NR55 127 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 DDX56Q9NY93 547 aaKnown RBP25.84■■□□□ 1.73
CPNE1-202ENST00000352393 ANKFY1Q9P2R3 1169 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 CLUHO75153 1309 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 A0A1W2PPM1 405 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 ATP2A1O14983 1001 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 TARSP26639 723 aaKnown RBP25.84■■□□□ 1.73
CPNE1-202ENST00000352393 GPX6P59796 221 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 SPDYAQ5MJ70 313 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 NIPA2Q8N8Q9 360 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 REPS2Q8NFH8 660 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 ACSF2Q96CM8 615 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-202ENST00000352393 TMEM121Q9BTD3 319 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 PHACTR1Q9C0D0 580 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 FETUBQ9UGM5 382 aa25.84■■□□□ 1.73
CPNE1-202ENST00000352393 FGFR1P11362 822 aa25.83■■□□□ 1.73
CPNE1-202ENST00000352393 ALDH3A1P30838 453 aa25.83■■□□□ 1.73
CPNE1-202ENST00000352393 DEPTORQ8TB45 409 aa25.83■■□□□ 1.73
CPNE1-202ENST00000352393 CDHR1Q96JP9 859 aa25.83■■□□□ 1.73
CPNE1-202ENST00000352393 DOCK1Q14185 1865 aa25.83■■□□□ 1.72
CPNE1-202ENST00000352393 LRRD1A4D1F6 860 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 LRRIQ4A6NIV6 560 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 K7ERI5 159 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 PIGHQ14442 188 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-202ENST00000352393 HHATQ5VTY9 493 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 DHX33Q9H6R0 707 aaKnown RBP25.82■■□□□ 1.72
CPNE1-202ENST00000352393 FBXO40Q9UH90 709 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 HAO1Q9UJM8 370 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 LCTP09848 1927 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 SGK1O00141 431 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 BANF1O75531 89 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 ASS1P00966 412 aaKnown RBP25.82■■□□□ 1.72
CPNE1-202ENST00000352393 T-ENOLP0DO92 83 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 ATP4AP20648 1035 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 ARL2P36404 184 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 GEMIN4P57678 1058 aaKnown RBP25.82■■□□□ 1.72
CPNE1-202ENST00000352393 TAP1Q03518 808 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 HIF1AQ16665 826 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 DCUN1D2Q6PH85 259 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 KIRREL3Q8IZU9 778 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 SLC7A6OSQ96CW6 309 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-202ENST00000352393 RABGEF1Q9UJ41 708 aa25.82■■□□□ 1.72
CPNE1-202ENST00000352393 C3orf70A6NLC5 250 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-202ENST00000352393 ZWINTO95229 277 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 ANKRD20A2Q5SQ80 823 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 ANKRD20A1Q5TYW2 823 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 ANKRD20A3Q5VUR7 823 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 BZW1Q7L1Q6 419 aaKnown RBP25.81■■□□□ 1.72
CPNE1-202ENST00000352393 OTOAQ7RTW8 1153 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 DHRS4Q9BTZ2 278 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 IMPG2Q9BZV3 1241 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 SPATA31C2B4DYI2 1134 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 BRD2P25440 801 aaKnown RBP25.81■■□□□ 1.72
CPNE1-202ENST00000352393 TGFB2P61812 414 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 SNRNP48Q6IEG0 339 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms