RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 IP6K2Q9UHH9 426 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 HMGCRP04035 888 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 ELNP15502 786 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 NDST1P52848 882 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 CNGA2Q16280 664 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 GLRA4Q5JXX5 417 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 HEXIM2Q96MH2 286 aaKnown RBP19.6■□□□□ 0.73
TRIM41-202ENST00000351937 SRRDQ9UH36 339 aa19.6■□□□□ 0.73
TRIM41-202ENST00000351937 TMEM191CA6NGB0 347 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 ORC1Q13415 861 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 C9orf57Q5W0N0 161 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 TWF2Q6IBS0 349 aaKnown RBP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 CCSAPQ6IQ19 270 aaPredicted RBP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 AADACL2Q6P093 401 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 DNAJC24Q6P3W2 148 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 SMG8Q8ND04 991 aaKnown RBP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 NT5C1AQ9BXI3 368 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 CREBZFQ9NS37 354 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 SGO2Q562F6 1265 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 C3orf20Q8ND61 904 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 NR2E1Q9Y466 385 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 SNX9Q9Y5X1 595 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 EPHB4P54760 987 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 GSPT2Q8IYD1 628 aaKnown RBP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 PCSK9Q8NBP7 692 aaKnown RBP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 SENP6Q9GZR1 1112 aaPredicted RBP19.59■□□□□ 0.73
TRIM41-202ENST00000351937 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
TRIM41-202ENST00000351937 PIRO00625 290 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 PPEF2O14830 753 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 RPS6KA5O75582 802 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 CYP3A5P20815 502 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 PPP1R15BQ5SWA1 713 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 EMBQ6PCB8 327 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 SLC13A5Q86YT5 568 aaPredicted RBP19.58■□□□□ 0.73
TRIM41-202ENST00000351937 EIF1ADQ8N9N8 165 aaKnown RBP19.58■□□□□ 0.73
TRIM41-202ENST00000351937 VIPAS39Q9H9C1 493 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 CHST12Q9NRB3 414 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 AMACRQ9UHK6 382 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 ST3GAL5Q9UNP4 418 aa19.58■□□□□ 0.73
TRIM41-202ENST00000351937 TRIP11Q15643 1979 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 O00370 1275 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 PSTPIP1O43586 416 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 MICAL2O94851 1124 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 RPL7AP62424 266 aaKnown RBP19.58■□□□□ 0.72
TRIM41-202ENST00000351937 FAM193AP78312 1265 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 PTPN20Q4JDL3 420 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 RHOT1Q8IXI2 618 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 WNT8BQ93098 351 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 CYTH4Q9UIA0 394 aa19.58■□□□□ 0.72
TRIM41-202ENST00000351937 CHRNA1P02708 482 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 PNPLA4P41247 253 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 TNNT3P45378 269 aaPredicted RBP19.57■□□□□ 0.72
TRIM41-202ENST00000351937 GSCP56915 257 aaPredicted RBP19.57■□□□□ 0.72
TRIM41-202ENST00000351937 STILQ15468 1287 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 MAP3K21Q5TCX8 1036 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 DCUN1D2Q6PH85 259 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 ADAT2Q7Z6V5 191 aaKnown RBP19.57■□□□□ 0.72
TRIM41-202ENST00000351937 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.57■□□□□ 0.723e-6■■■■□ 24.6
TRIM41-202ENST00000351937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRIM41-202ENST00000351937 WDR35Q9P2L0 1181 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 MTUS1Q9ULD2 1270 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 ZSCAN5CA6NGD5 496 aaPredicted RBP19.57■□□□□ 0.72
TRIM41-202ENST00000351937 PAK2Q13177 524 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 LCLAT1Q6UWP7 414 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 C18orf8Q96DM3 657 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 DDX27Q96GQ7 796 aaKnown RBP19.57■□□□□ 0.72
TRIM41-202ENST00000351937 ZNF560Q96MR9 790 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 MCEEQ96PE7 176 aa19.57■□□□□ 0.72
TRIM41-202ENST00000351937 CENPFP49454 3210 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 BHMG1C9JSJ3 638 aaPredicted RBP19.56■□□□□ 0.72
TRIM41-202ENST00000351937 TRPA1O75762 1119 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 GJB6O95452 261 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 MYCNP04198 464 aaPredicted RBP19.56■□□□□ 0.72
TRIM41-202ENST00000351937 GPD2P43304 727 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CARSP49589 748 aaKnown RBP19.56■□□□□ 0.72
TRIM41-202ENST00000351937 GYS2P54840 703 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 MGAT3Q09327 533 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 FBXO47Q5MNV8 452 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CYP4A22Q5TCH4 519 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 UNC93AQ86WB7 457 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CASKIN2Q8WXE0 1202 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 IFT81Q8WYA0 676 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 PLEKHA4Q9H4M7 779 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 ERVK-5Q9HDB9 667 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 GRIN2DO15399 1336 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 ESYT3A0FGR9 886 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 M0QYV0 167 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 PHF2O75151 1096 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CHRNA3P32297 505 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CUL1Q13616 776 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 ARRDC4Q8NCT1 418 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CAVIN3Q969G5 261 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 CPXM1Q96SM3 734 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 MRPL45Q9BRJ2 306 aaKnown RBP19.56■□□□□ 0.72
TRIM41-202ENST00000351937 ACBD3Q9H3P7 528 aa19.56■□□□□ 0.72
TRIM41-202ENST00000351937 DDX20Q9UHI6 824 aaKnown RBP19.56■□□□□ 0.72
TRIM41-202ENST00000351937 SIGLEC16A6NMB1 481 aa19.55■□□□□ 0.72
TRIM41-202ENST00000351937 GPR182O15218 404 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms