RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TSEN2Q8NCE0 465 aaKnown RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 C3orf20Q8ND61 904 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 SLCO2A1Q92959 643 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 KIF12Q96FN5 646 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM176AQ96HP8 235 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 RUNDC3BQ96NL0 473 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 MTG1Q9BT17 334 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ACBD3Q9H3P7 528 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 LRRC19Q9H756 370 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 MED4Q9NPJ6 270 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ST7Q9NRC1 585 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 SNTG2Q9NY99 539 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 IP6K2Q9UHH9 426 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 AMACRQ9UHK6 382 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 FAM153AQ9UHL3 310 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 CYTH4Q9UIA0 394 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 KIAA1257Q9ULG3 409 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 BARX2Q9UMQ3 279 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 NFU1Q9UMS0 254 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 GABRQQ9UN88 632 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ANK1P16157 1881 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 EVPLQ92817 2033 aa7.34□□□□□ -1.24
TRIM55-203ENST00000350034 SPTBN5Q9NRC6 3674 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 TCRBV7S2A1N4TA0A589 114 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 TMEM88BA6NKF7 163 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 SIGLEC16A6NMB1 481 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 PIRO00625 290 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 TTI1O43156 1089 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 SEPT4O43236 478 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 RECQL4O94761 1208 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 MICAL2O94851 1124 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 SYF2O95926 243 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 HMGCRP04035 888 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 CD19P15391 556 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 CYP3A5P20815 502 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 CST5P28325 142 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 HSPA9P38646 679 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 GPD2P43304 727 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 TNNT3P45378 269 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 FNTAP49354 379 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 FLT3LGP49771 235 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 YARSP54577 528 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 RPL7AP62424 266 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 OGDHQ02218 1023 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 GPS2Q13227 327 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 KLF1Q13351 362 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 ZNF268Q14587 947 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 PKDCCQ504Y2 493 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 C9orf57Q5W0N0 161 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 ALS2CLQ60I27 953 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 CCSAPQ6IQ19 270 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 DNAJC24Q6P3W2 148 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 TTC27Q6P3X3 843 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 LCLAT1Q6UWP7 414 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 PHLDB2Q86SQ0 1253 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 ERICH1Q86X53 443 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 JAMLQ86YT9 394 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 RHOT1Q8IXI2 618 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 IQCKQ8N0W5 287 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 C7orf31Q8N865 590 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 SMG8Q8ND04 991 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 KLHDC9Q8NEP7 349 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 BEST2Q8NFU1 509 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 EXD1Q8NHP7 514 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 FAM71BQ8TC56 605 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 FNIP1Q8TF40 1166 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 MCRS1Q96EZ8 462 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 SH3GL2Q99962 352 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 TXLNGYQ9BZA5 131 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 CELF4Q9BZC1 486 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 ARHGAP39Q9C0H5 1083 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 FAM114A2Q9NRY5 505 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 WDR35Q9P2L0 1181 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 MTUS1Q9ULD2 1270 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 STRIP2Q9ULQ0 834 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 UBQLN1Q9UMX0 589 aaKnown RBP7.33□□□□□ -1.24
TRIM55-203ENST00000350034 CEP83Q9Y592 693 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 NME7Q9Y5B8 376 aa7.33□□□□□ -1.24
TRIM55-203ENST00000350034 DOCK3Q8IZD9 2030 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 A0A0U1RQG5 324 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 SMIM28A0A1B0GU29 152 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PODXLO00592 558 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PPEF2O14830 753 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 GJB6O95452 261 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 CD4P01730 458 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 ERBB2P04626 1255 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 RPLP2P05387 115 aaKnown RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PFKMP08237 780 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 FAM163BP0C2L3 166 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 C6orf222P0C671 652 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms