RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CCDC181Q5TID7 509 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 DENND1BQ6P3S1 775 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 LIMS2Q7Z4I7 341 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 ERICH1Q86X53 443 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 LRRN4CLQ8ND94 238 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 UBXN4Q92575 508 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 PSMB7Q99436 277 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 STRIP2Q9ULQ0 834 aa19.81■□□□□ 0.76
PTN-201ENST00000348225 PACSIN2Q9UNF0 486 aaPredicted RBP19.81■□□□□ 0.76
PTN-201ENST00000348225 TDRD15B5MCY1 1934 aaKnown RBP19.81■□□□□ 0.76
PTN-201ENST00000348225 M0QYV0 167 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 O00370 1275 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 ZNF185O15231 689 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 INPPL1O15357 1258 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 MICAL2O94851 1124 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 DNA2P51530 1060 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 PTP4A2Q12974 167 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 MESDQ14696 234 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 PKN2Q16513 984 aaKnown RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 LCLAT1Q6UWP7 414 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 SLC39A5Q6ZMH5 540 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 ANKRD33Q7Z3H0 272 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 ADGRF2Q8IZF7 708 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 DDX27Q96GQ7 796 aaKnown RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 HES6Q96HZ4 224 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 PBKQ96KB5 322 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 UROC1Q96N76 676 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 PARVAQ9NVD7 372 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 CHORDC1Q9UHD1 332 aaPredicted RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 ANAPC7Q9UJX3 599 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 L1RE1Q9UN81 338 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 DCDC2CA8MYV0 355 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 WARSP23381 471 aaKnown RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 PAX3P23760 479 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 CXCR5P32302 372 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 GNL1P36915 607 aaPredicted RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 PAFAH1B1P43034 410 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 CLCNKBP51801 687 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 AFF1P51825 1210 aaKnown RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 ATN1P54259 1190 aaPredicted RBP19.8■□□□□ 0.76
PTN-201ENST00000348225 FAM189BP81408 668 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 PLEKHA7Q6IQ23 1121 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 GLB1LQ6UWU2 654 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 CREG2Q8IUH2 290 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 WDTC1Q8N5D0 677 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 DNAJC5GQ8N7S2 189 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 COG1Q8WTW3 980 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 KBTBD7Q8WVZ9 684 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 SEPT8Q92599 483 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 APBB2Q92870 758 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 INPP5FQ9Y2H2 1132 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 ALG6Q9Y672 507 aa19.8■□□□□ 0.76
PTN-201ENST00000348225 TANC1Q9C0D5 1861 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 TMEM110-MUSTN1A8MSY1 372 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 MIF4GDA9UHW6 222 aaKnown RBP19.79■□□□□ 0.76
PTN-201ENST00000348225 CYB561D2O14569 222 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 KCNK3O14649 394 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 NBNO60934 754 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 PARNO95453 639 aaKnown RBP19.79■□□□□ 0.76
PTN-201ENST00000348225 POMCP01189 267 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 HSPA8P11142 646 aaKnown RBP19.79■□□□□ 0.76
PTN-201ENST00000348225 COL6A1P12109 1028 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 CFAP221Q4G0U5 840 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 PLEKHG4Q58EX7 1191 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 ACOT1Q86TX2 421 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 RTN4RL1Q86UN2 441 aaPredicted RBP19.79■□□□□ 0.76
PTN-201ENST00000348225 LINC01599Q8WXQ3 324 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 ARMC5Q96C12 935 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 TOX2Q96NM4 488 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 SELENOOQ9BVL4 669 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 LCMT1Q9UIC8 334 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 TSPAN16Q9UKR8 245 aa19.79■□□□□ 0.76
PTN-201ENST00000348225 CASTOR2A6NHX0 329 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 TAP1Q03518 808 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 TUSC3Q13454 348 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 MAMLD1Q13495 774 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 PTPROQ16827 1216 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 UPP1Q16831 310 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 C2CD6Q53TS8 623 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 C1orf53Q5VUE5 145 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 DNAJC24Q6P3W2 148 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 TMEM86AQ8N2M4 240 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 PDCL2Q8N4E4 241 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 UBL4BQ8N7F7 174 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 URGCPQ8TCY9 931 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 TNIP3Q96KP6 325 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 MIS12Q9H081 205 aa19.78■□□□□ 0.76
PTN-201ENST00000348225 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTN-201ENST00000348225 V9GYY5 206 aaPredicted RBP19.78■□□□□ 0.76
PTN-201ENST00000348225 MYO1FO00160 1098 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 MNX1P50219 401 aaPredicted RBP19.77■□□□□ 0.76
PTN-201ENST00000348225 GOLGA7BQ2TAP0 167 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 TEX35Q5T0J7 233 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 ARHGAP17Q68EM7 881 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 DSTYKQ6XUX3 929 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 RSRC2Q7L4I2 434 aaKnown RBP19.77■□□□□ 0.76
PTN-201ENST00000348225 CRYBG2Q8N1P7 616 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 ANKLE1Q8NAG6 615 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 SENP8Q96LD8 212 aa19.77■□□□□ 0.76
PTN-201ENST00000348225 HIPK3Q9H422 1215 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms