RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 KCNK3O14649 394 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 MICAL2O94851 1124 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 FAM163BP0C2L3 166 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 SCNN1GP51170 649 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 ELF2Q15723 593 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 PTPROQ16827 1216 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 CFAP221Q4G0U5 840 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 PLEKHA7Q6IQ23 1121 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 DPH6Q7L8W6 267 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 LIMS2Q7Z4I7 341 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 ERICH1Q86X53 443 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 TOP6BLQ8N6T0 577 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 APPL2Q8NEU8 664 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 RABGGTAQ92696 567 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 PARVAQ9NVD7 372 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 ANAPC7Q9UJX3 599 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 PCNTO95613 3336 aa22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 MIF4GDA9UHW6 222 aaKnown RBP22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 PDE2AO00408 941 aaPredicted RBP22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 HUS1O60921 280 aa22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 RPL9P32969 192 aaKnown RBP22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 ZNF598Q86UK7 904 aaKnown RBP22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 MSANTD4Q8NCY6 345 aa22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 FTHL17Q9BXU8 183 aa22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 SNX25Q9H3E2 840 aa22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 STRIP2Q9ULQ0 834 aa22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 TDRD15B5MCY1 1934 aaKnown RBP22.77■■□□□ 1.24
TSPAN3-202ENST00000346495 AFF1P51825 1210 aaKnown RBP22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 ITIH3Q06033 890 aa22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 C2CD6Q53TS8 623 aa22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 LCLAT1Q6UWP7 414 aa22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 FAM43BQ6ZT52 329 aaPredicted RBP22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 SLC24A5Q71RS6 500 aa22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 KBTBD7Q8WVZ9 684 aa22.76■■□□□ 1.23
TSPAN3-202ENST00000346495 A8MXQ7 604 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 C9IYK1 514 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 M0QYV0 167 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 PITPNM1O00562 1244 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 PODXLO00592 558 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 DDX3YO15523 660 aaKnown RBP22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 EOMESO95936 686 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 COMTP21964 271 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 GNL1P36915 607 aaPredicted RBP22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 GRIK3Q13003 919 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 MAMLD1Q13495 774 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 PHLDB2Q86SQ0 1253 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 ACOT1Q86TX2 421 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 BTBD6Q96KE9 485 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 WNT8AQ9H1J5 351 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 L1RE1Q9UN81 338 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 MYO1FO00160 1098 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 INPPL1O15357 1258 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 IBSPP21815 317 aaPredicted RBP22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 WARSP23381 471 aaKnown RBP22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 RTN4RL1Q86UN2 441 aaPredicted RBP22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 ADGRF2Q8IZF7 708 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 GPR161Q8N6U8 529 aaKnown RBP22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 UBL4BQ8N7F7 174 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 CRISPLD2Q9H0B8 497 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 NME7Q9Y5B8 376 aa22.75■■□□□ 1.23
TSPAN3-202ENST00000346495 CYB561D2O14569 222 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 SLC1A1P43005 524 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 CLCNKBP51801 687 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 FAM189BP81408 668 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 TAP1Q03518 808 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 LLGL2Q6P1M3 1020 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 CRYBG2Q8N1P7 616 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 FEZF2Q8TBJ5 459 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 ANKRD7Q92527 254 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 DDX27Q96GQ7 796 aaKnown RBP22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 MS4A14Q96JA4 679 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 LCMT1Q9UIC8 334 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 TSPAN16Q9UKR8 245 aa22.74■■□□□ 1.23
TSPAN3-202ENST00000346495 SPOPO43791 374 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 FGFR1P11362 822 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 GPD2P43304 727 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 GOLGA7BQ2TAP0 167 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 PTPN20Q4JDL3 420 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 ARHGAP17Q68EM7 881 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 DNAJC24Q6P3W2 148 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 CTU1Q7Z7A3 348 aaKnown RBP22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 PDCL2Q8N4E4 241 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 ACTRT1Q8TDG2 376 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 UROC1Q96N76 676 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 WDR35Q9P2L0 1181 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 CYTH4Q9UIA0 394 aa22.73■■□□□ 1.23
TSPAN3-202ENST00000346495 TCRBV5S1A1TA0A578 114 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 CEP104O60308 925 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 PQBP1O60828 265 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 POMCP01189 267 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 PAX3P23760 479 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 CTNNA2P26232 953 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 GSCP56915 257 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 UPP1Q16831 310 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 PPP1R26Q5T8A7 1209 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 SLC39A5Q6ZMH5 540 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 C12orf29Q8N999 325 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 C3orf20Q8ND61 904 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 SPATA4Q8NEY3 305 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 LINC01599Q8WXQ3 324 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms