RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 MCF2P10911 925 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 INHBEP58166 350 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 BRD3Q15059 726 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 ACAD10Q6JQN1 1059 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 RUFY4Q6ZNE9 571 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 RHOT2Q8IXI1 618 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 MMGT1Q8N4V1 131 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 RBBP8NLQ8NC74 664 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-202ENST00000345734 ZDHHC1Q8WTX9 485 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 HDAC7Q8WUI4 952 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 HES6Q96HZ4 224 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 BTBD6Q96KE9 485 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 APBA2Q99767 749 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 LRRC1Q9BTT6 524 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 AMFRQ9UKV5 643 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 CEP83Q9Y592 693 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 PCDHB2Q9Y5E7 798 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 CCDC151A5D8V7 595 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 RRN3P2A6NIE6 340 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM110-MUSTN1A8MSY1 372 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 CEP104O60308 925 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 IGHA2P01877 340 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 TNNC2P02585 160 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 CYP1A2P05177 515 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 MYL3P08590 195 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 UNGP13051 313 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-202ENST00000345734 TBXAS1P24557 533 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF200P98182 395 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-202ENST00000345734 ITIH3Q06033 890 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 TRPC3Q13507 836 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 SCARA5Q6ZMJ2 495 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 PHLDB2Q86SQ0 1253 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 CPNE8Q86YQ8 564 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 PASD1Q8IV76 773 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 UBR7Q8N806 425 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 CPA5Q8WXQ8 436 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF653Q96CK0 615 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 ANKRD36BP1Q96IX9 119 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 NUP85Q9BW27 656 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 IMPG2Q9BZV3 1241 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 ARHGAP39Q9C0H5 1083 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 ADAMTS10Q9H324 1103 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 RNF14Q9UBS8 474 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 CNTN6Q9UQ52 1028 aa9.84□□□□□ -0.83
ATG4A-202ENST00000345734 DDX3YO15523 660 aaKnown RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 GPR32O75388 356 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SASH3O75995 380 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 IL18RAPO95256 599 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 TBC1D8O95759 1140 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 WEE2P0C1S8 567 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CD58P19256 250 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 GNA15P30679 374 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF132P52740 706 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 HADHBP55084 474 aaKnown RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 WDR4P57081 412 aaKnown RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 BPIFB4P59827 614 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SREBF2Q12772 1141 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 TCEAL1Q15170 157 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 LONRF2Q1L5Z9 754 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SGSM1Q2NKQ1 1148 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SLC10A6Q3KNW5 377 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 C2CD6Q53TS8 623 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 NAA35Q5VZE5 725 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 JADE1Q6IE81 842 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF410Q86VK4 478 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 TRPV1Q8NER1 839 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SOCS4Q8WXH5 440 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CYFIP2Q96F07 1278 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 PBKQ96KB5 322 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 XYLT2Q9H1B5 865 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ARFGAP3Q9NP61 516 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 KLK14Q9P0G3 267 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 STIM2Q9P246 746 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SIX4Q9UIU6 781 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ALG6Q9Y672 507 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 NRCAMQ92823 1304 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 A0A1B0GUA9 196 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 TARSL2A2RTX5 802 aaKnown RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CES2O00748 559 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ERLIN2O94905 339 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 KRT19P08727 400 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CYP2C9P11712 490 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 TM4SF4P48230 202 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 GUCY2FP51841 1108 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 SLC7A5Q01650 507 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CENPCQ03188 943 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 CLN3Q13286 438 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 MESDQ14696 234 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF699Q32M78 642 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 BEND6Q5SZJ8 279 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 DCAF12L1Q5VU92 463 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 LLGL2Q6P1M3 1020 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 WDR93Q6P2C0 686 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF677Q86XU0 584 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 RGL4Q8IZJ4 473 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 C1orf127Q8N9H9 656 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 USP38Q8NB14 1042 aa9.83□□□□□ -0.84
ATG4A-202ENST00000345734 ZNF564Q8TBZ8 553 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-202ENST00000345734 DNAJB3Q8WWF6 145 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms