RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ANKRD62A6NC57 917 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 BTNL10A8MVZ5 291 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 F8W810 466 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 DGKIO75912 1065 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 AMHP03971 560 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 TMEM253P0C7T8 217 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 LMO2P25791 158 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 SSTR3P32745 418 aaPredicted RBP17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 WDR5P61964 334 aaKnown RBP17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 NOMO3P69849 1222 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 CENPCQ03188 943 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 PPIGQ13427 754 aaKnown RBP eCLIP17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 CNGA2Q16280 664 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 SGO2Q562F6 1265 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 C16orf59Q7L2K0 433 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 ACOT1Q86TX2 421 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 MYH10P35580 1976 aa17.37■□□□□ 0.37
CEACAM1-202ENST00000344391 I3L4J1 428 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 KIF2AO00139 706 aaPredicted RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 O00370 1275 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 HCRTO43612 131 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 TUBB4AP04350 444 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 CYP11A1P05108 521 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 ODC1P11926 461 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 TNNT1P13805 278 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 ETF1P62495 437 aaKnown RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 DEFB103AP81534 67 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 PASD1Q8IV76 773 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 C7orf61Q8IZ16 206 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 LRRC43Q8N309 656 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 SPATA18Q8TC71 538 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 HASPINQ8TF76 798 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 BADQ92934 168 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 DPEP3Q9H4B8 488 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 SALL4Q9UJQ4 1053 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 PTPRSQ13332 1948 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 FAM170AA1A519 330 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 NRP1O14786 923 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 KIF5CO60282 957 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 LSM8O95777 96 aaKnown RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 CDH5P33151 784 aaPredicted RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 LHX1P48742 406 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 FPGSQ05932 587 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 NAA35Q5VZE5 725 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 RNF10Q8N5U6 811 aaKnown RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 C12orf29Q8N999 325 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 CPA5Q8WXQ8 436 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 CTNNBL1Q8WYA6 563 aaPredicted RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 TMEM175Q9BSA9 504 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 ZNF518BQ9C0D4 1074 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 DNAI2Q9GZS0 605 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 THAP2Q9H0W7 228 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 LHX5Q9H2C1 402 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 MYO1AQ9UBC5 1043 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 HCSTQ9UBK5 93 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 PRG3Q9Y2Y8 225 aaPredicted RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 PAXBP1Q9Y5B6 917 aa17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 TIMM13Q9Y5L4 95 aaPredicted RBP17.36■□□□□ 0.37
CEACAM1-202ENST00000344391 MACROD2A1Z1Q3 448 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 ALDH2P05091 517 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 ABCB4P21439 1286 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 NSFP46459 744 aaKnown RBP17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 SLC11A1P49279 550 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 GNG11P61952 73 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 STILQ15468 1287 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 DENND1BQ6P3S1 775 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 LCLAT1Q6UWP7 414 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 WDTC1Q8N5D0 677 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 TMEM35BQ8NCS4 154 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 SECISBP2LQ93073 1101 aaKnown RBP17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 ZNF689Q96CS4 500 aaPredicted RBP17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 TNIP3Q96KP6 325 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 DSEQ9UL01 958 aa17.35■□□□□ 0.37
CEACAM1-202ENST00000344391 NCANO14594 1321 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 A0A0A6YYK5 440 aaPredicted RBP17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 ARHGEF37A1IGU5 675 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 MICAL2O94851 1124 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 FGBP02675 491 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 GALTP07902 379 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 TYMPP19971 482 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 GPC5P78333 572 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 ZNF569Q5MCW4 686 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 PPP1R26Q5T8A7 1209 aaPredicted RBP17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 ARHGAP17Q68EM7 881 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 OTOP2Q7RTS6 562 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 PHF13Q86YI8 300 aaPredicted RBP17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 MCOLN2Q8IZK6 566 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 ARHGEF26Q96DR7 871 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 LPIN3Q9BQK8 851 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 HTATIP2Q9BUP3 242 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 COLEC11Q9BWP8 271 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 RC3H2Q9HBD1 1191 aaKnown RBP17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 PCDHB8Q9UN66 801 aa17.34■□□□□ 0.37
CEACAM1-202ENST00000344391 FAN1Q9Y2M0 1017 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms