RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ROPN1Q9HAT0 212 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 PTPRFP10586 1907 aa15.74■□□□□ 0.11
VIPAS39-202ENST00000343765 TMEM120BA0PK00 339 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 LSM8O95777 96 aaKnown RBP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 IFNB1P01574 187 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 TXNP10599 105 aaKnown RBP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 CETPP11597 493 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 KLRC2P26717 231 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 IREB2P48200 963 aaKnown RBP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 CAV1Q03135 178 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 WDR72Q3MJ13 1102 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 KCNT1Q5JUK3 1230 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 SPOCD1Q6ZMY3 1216 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 DPH6Q7L8W6 267 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 C2orf40Q9H1Z8 148 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 SAE1Q9UBE0 346 aaPredicted RBP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 RBPJLQ9UBG7 517 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 TJP3O95049 919 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 NFICP08651 508 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 ARSEP51690 589 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 PTPN20Q4JDL3 420 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 TNFAIP8L3Q5GJ75 292 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 CYP4X1Q8N118 509 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 SERPINB12Q96P63 405 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 RBM15Q96T37 977 aaKnown RBP eCLIP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 ELAC2Q9BQ52 826 aaKnown RBP15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 CDT1Q9H211 546 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 C10orf88Q9H8K7 445 aa15.73■□□□□ 0.11
VIPAS39-202ENST00000343765 TCRBV5S1A1TA0A578 114 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 ACKR2O00590 384 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 LGR5O75473 907 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 PSMA2P25787 234 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 GPS1Q13098 491 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 GRM1Q13255 1194 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 PPP1R2P3Q6NXS1 205 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 TSHZ1Q6ZSZ6 1077 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 CCDC13Q8IYE1 715 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 EMC1Q8N766 993 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 GDAP1Q8TB36 358 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 MPHOSPH6Q99547 160 aaKnown RBP15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 RNPEPQ9H4A4 650 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 SAYSD1Q9NPB0 183 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 HMGXB4Q9UGU5 601 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 CYTH4Q9UIA0 394 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 GGA2Q9UJY4 613 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 IGKV6-21A0A0C4DH24 114 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 FSBPO95073 299 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 RFC1P35251 1148 aaPredicted RBP15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 ARMC9Q7Z3E5 817 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 JOSD2Q8TAC2 188 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 TMEM121Q9BTD3 319 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 SMYD3Q9H7B4 428 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 SYNCQ9H7C4 482 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 AGTPBP1Q9UPW5 1226 aa15.72■□□□□ 0.11
VIPAS39-202ENST00000343765 TFDP1Q14186 410 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 SURF1Q15526 300 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 PLPPR4Q7Z2D5 763 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 CCDC197Q8NCU1 140 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 PTPRHQ9HD43 1115 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 ADARB2Q9NS39 739 aaKnown RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 MCM3APO60318 1980 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 GPR25O00155 361 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 DNM1LO00429 736 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 SLC25A27O95847 323 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 GH1P01241 217 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 PROZP22891 400 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 MBTD1Q05BQ5 628 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 ACTN3Q08043 901 aaPredicted RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 FASTKD3Q14CZ7 662 aaKnown RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 HIBCHQ6NVY1 386 aaPredicted RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 VSTM1Q6UX27 236 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 ERO1BQ86YB8 467 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 SRRM1Q8IYB3 904 aaKnown RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 MRRFQ96E11 262 aaKnown RBP15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 CPB2Q96IY4 423 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 SIX4Q9UIU6 781 aa15.71■□□□□ 0.11
VIPAS39-202ENST00000343765 hCG_1818297A0A087WSY0 165 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 GOLGA8MH3BSY2 632 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 SGK1O00141 431 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ITGBL1O95965 494 aaPredicted RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ITGB3P05106 788 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 KRT3P12035 628 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 MAGEA4P43358 317 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PSMC1P62191 440 aaKnown RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PIGHQ14442 188 aaPredicted RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 ZNF667Q5HYK9 610 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 PPP1R15BQ5SWA1 713 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 C1orf127Q8N9H9 656 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 BBOF1Q8ND07 529 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 TWNKQ96RR1 684 aa15.7■□□□□ 0.1
VIPAS39-202ENST00000343765 FZD8Q9H461 694 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms