RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 AGR3Q8TD06 166 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 GIPC3Q8TF64 312 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 DSCC1Q9BVC3 393 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SRP68Q9UHB9 627 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 DDX20Q9UHI6 824 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 EML6Q6ZMW3 1958 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SLC26A4O43511 780 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SEC24AO95486 1093 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 GRIK1P39086 918 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 RAD23AP54725 363 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ZBTB49Q6ZSB9 765 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SNX32Q86XE0 403 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 MTMR6Q9Y217 621 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.41□□□□□ -1.384e-13■■■■□ 26.6
VCAN-203ENST00000343200 CENPBD1B2RD01 187 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 CAPZA2P47755 286 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ERFP50548 548 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 NR1H2P55055 460 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 CHRNB3Q05901 458 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 KRT33BQ14525 404 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SLC39A14Q15043 492 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 USP39Q53GS9 565 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 ZBTB8OSQ8IWT0 167 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SUPT20HQ8NEM7 779 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TP53INP1Q96A56 240 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 CCDC115Q96NT0 180 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PHB2Q99623 299 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ECSITQ9BQ95 431 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SLC6A15Q9H2J7 730 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 GGT7Q9UJ14 662 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 AK5Q9Y6K8 562 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 DISP3Q9P2K9 1392 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 PLOD2O00469 737 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 FEN1P39748 380 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 SLC1A4P43007 532 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SLC16A1P53985 500 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 KCNK10P57789 538 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 TRAF2Q12933 501 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 GSTA3Q16772 222 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 UGP2Q16851 508 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 KIAA1755Q5JYT7 1200 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 SWT1Q5T5J6 900 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 CWF19L1Q69YN2 538 aaKnown RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ZNF589Q86UQ0 364 aaPredicted RBP6.41□□□□□ -1.38
VCAN-203ENST00000343200 ULK2Q8IYT8 1036 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 BLIDQ8IZY5 108 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 DEPTORQ8TB45 409 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 APBB2Q92870 758 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 ANTXR1Q9H6X2 564 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 MAN1B1Q9UKM7 699 aa6.41□□□□□ -1.38
VCAN-203ENST00000343200 IFT140Q96RY7 1462 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 LOC100506127A0A0U1RQW1 187 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 CPA1P15085 419 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 POLGP54098 1239 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 SLC34A1Q06495 639 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 HMBOX1Q6NT76 420 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 KBTBD8Q8NFY9 601 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 ZNF507Q8TCN5 953 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 GJA10Q969M2 543 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 L3MBTL3Q96JM7 780 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 ERMAPQ96PL5 475 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 UBE2TQ9NPD8 197 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 GALNT8Q9NY28 637 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 ABCA10Q8WWZ4 1543 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 COL17A1Q9UMD9 1497 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 CDHR2Q9BYE9 1310 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 SYNJ2BP-COX16A0A087WUM0 186 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 NOTOA8MTQ0 251 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 BTBD18B2RXH4 712 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 MTSS1O43312 755 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 RPN2P04844 631 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 CLTBP09497 229 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 PTPN4P29074 926 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 TECP42680 631 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 SMCO1Q147U7 214 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 NDUFAF2Q8N183 169 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 METTL13Q8N6R0 699 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 SERPINB12Q96P63 405 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 AIFM2Q9BRQ8 373 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 METTL5Q9NRN9 209 aaKnown RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 COX16Q9P0S2 106 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 NUDT5Q9UKK9 219 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 N4BP2Q86UW6 1770 aaPredicted RBP6.4□□□□□ -1.38
VCAN-203ENST00000343200 METTL21EPA6NDL7 271 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 F8W810 466 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 PLOD3O60568 738 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 CLUP10909 449 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 CAPGP40121 348 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 PPP3CCP48454 512 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 ACADVLP49748 655 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 TAP1Q03518 808 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 MPP2Q14168 576 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 C11orf74Q86VG3 221 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 CYP4Z2PQ8N1L4 340 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 PPM1NQ8N819 430 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 POC5Q8NA72 575 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 PSMA8Q8TAA3 256 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 SEC31BQ9NQW1 1179 aa6.4□□□□□ -1.38
VCAN-203ENST00000343200 KLHL8Q9P2G9 620 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms