RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TDRKHQ9Y2W6 561 aaKnown RBP19.44■□□□□ 0.7
SMPD1-201ENST00000342245 NFASCO94856 1347 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 A0A1W2PPM1 405 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 CD48P09326 243 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 SLC5A2P31639 672 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 ADCY7P51828 1080 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 SLC12A3P55017 1021 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 THOC7Q6I9Y2 204 aaKnown RBP19.44■□□□□ 0.7
SMPD1-201ENST00000342245 TCP10LQ8TDR4 215 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 NUP85Q9BW27 656 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 KIAA1522Q9P206 1035 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-201ENST00000342245 WDR91A4D1P6 747 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 TTLL13PA6NNM8 815 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 SPDYE16A6NNV3 312 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-201ENST00000342245 DKC1O60832 514 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMPD1-201ENST00000342245 LRRN2O75325 713 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 PHBP35232 272 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 HOXD13P35453 343 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 CASP5P51878 434 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 NUP107P57740 925 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 LPCAT4Q643R3 524 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 ARL10Q8N8L6 244 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 SCAIQ8N9R8 606 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 CATSPER1Q8NEC5 780 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 GRIP2Q9C0E4 1043 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 VPS37BQ9H9H4 285 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 GTF3C4Q9UKN8 822 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 NIP7Q9Y221 180 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMPD1-201ENST00000342245 PCDHB13Q9Y5F0 798 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 CPA2P48052 419 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 CASP4P49662 377 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 SNAPC2Q13487 334 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 TRIP10Q15642 601 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 CCDC142Q17RM4 750 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 TTC7BQ86TV6 843 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 BANPQ8N9N5 519 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 HAUS8Q9BT25 410 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 MKNK2Q9HBH9 465 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 TMEM260Q9NX78 707 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 RSL24D1Q9UHA3 163 aaKnown RBP19.43■□□□□ 0.7
SMPD1-201ENST00000342245 ADAMTS6Q9UKP5 1117 aa19.43■□□□□ 0.7
SMPD1-201ENST00000342245 ALOX15BO15296 676 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 DHRS4L1P0CG22 281 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 PEX2P28328 305 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 APOFQ13790 326 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 ARSHQ5FYA8 562 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 OGFRL1Q5TC84 451 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-201ENST00000342245 FBXL19Q6PCT2 694 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 TMEM126BQ8IUX1 230 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 MRPL1Q9BYD6 325 aaKnown RBP19.42■□□□□ 0.7
SMPD1-201ENST00000342245 ARMCX1Q9P291 453 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 FAM32AQ9Y421 112 aaKnown RBP19.42■□□□□ 0.7
SMPD1-201ENST00000342245 DTNAQ9Y4J8 743 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 NUB1Q9Y5A7 615 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 NHSL1Q5SYE7 1610 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 STARD3NLO95772 234 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 CDH2P19022 906 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-201ENST00000342245 PMLP29590 882 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 CACNB1Q02641 598 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-201ENST00000342245 PDAP1Q13442 181 aaKnown RBP19.42■□□□□ 0.7
SMPD1-201ENST00000342245 NLRX1Q86UT6 975 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 CCT7Q99832 543 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 MAD1L1Q9Y6D9 718 aa19.42■□□□□ 0.7
SMPD1-201ENST00000342245 A0A088AWK7 358 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 SNAP23O00161 211 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 FOXN3O00409 490 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-201ENST00000342245 TSPY3P0CV98 308 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 TSPY8P0CW00 308 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 ZNF12P17014 697 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 HSPA13P48723 471 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 ARHGAP44Q17R89 818 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 LRRC36Q1X8D7 754 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 KLHL38Q2WGJ6 581 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 CCDC153Q494R4 210 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 PYROXD1Q8WU10 500 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 ATG4AQ8WYN0 398 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 HAS1Q92839 578 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 CLPTM1LQ96KA5 538 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 DHRS1Q96LJ7 313 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 NLRP4Q96MN2 994 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 OSBPL6Q9BZF3 934 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 CEPT1Q9Y6K0 416 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 F5H6K3 240 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 DNALI1O14645 258 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-201ENST00000342245 KLRC2P26717 231 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 PCSK6P29122 969 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 CDK9P50750 372 aaKnown RBP19.41■□□□□ 0.7
SMPD1-201ENST00000342245 PFKPQ01813 784 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 NCOA4Q13772 614 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 ADGRD1Q6QNK2 874 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 SLC26A7Q8TE54 656 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 PYDC1Q8WXC3 89 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 TMEM47Q9BQJ4 181 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 NRDE2Q9H7Z3 1164 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 TBC1D23Q9NUY8 699 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 C6orf203Q9P0P8 240 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-201ENST00000342245 PPARGC1AQ9UBK2 798 aaKnown RBP19.41■□□□□ 0.7
SMPD1-201ENST00000342245 HESX1Q9UBX0 185 aa19.41■□□□□ 0.7
SMPD1-201ENST00000342245 ZNF335Q9H4Z2 1342 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms