RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 F8W810 466 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 LILRA1O75019 489 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 CXCL8P10145 99 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 TNFSF9P41273 254 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 GIPRP48546 466 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 SOX4Q06945 474 aaPredicted RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 POSTNQ15063 836 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 BMT2Q1RMZ1 405 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 ZBTB41Q5SVQ8 909 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 C10orf62Q5T681 223 aaPredicted RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 TTC39BQ5VTQ0 682 aaPredicted RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 KRBA2Q6ZNG9 492 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 GRAMD1CQ8IYS0 662 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 MRPL43Q8N983 215 aaKnown RBP11.13□□□□□ -0.63
TPM3-207ENST00000341372 ZNF507Q8TCN5 953 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 HPS3Q969F9 1004 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 NKD1Q969G9 470 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 MFSD3Q96ES6 412 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 MSTO1Q9BUK6 570 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 IKZF4Q9H2S9 585 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 ADAM28Q9UKQ2 775 aa11.13□□□□□ -0.63
TPM3-207ENST00000341372 CASTOR2A6NHX0 329 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 HIDE1A8MVS5 230 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 PHACTR2O75167 634 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 CSPG5O95196 566 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 HOXD13P35453 343 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 LTBRP36941 435 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 MATR3P43243 847 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM3-207ENST00000341372 ADAM15Q13444 863 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 PTPN14Q15678 1187 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 ZBTB6Q15916 424 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 FUT10Q6P4F1 479 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 XKR5Q6UX68 686 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 SLITRK4Q8IW52 837 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 CD302Q8IX05 232 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
TPM3-207ENST00000341372 MYO1HQ8N1T3 1032 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 SUV39H2Q9H5I1 410 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 CHST7Q9NS84 486 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 CACNG4Q9UBN1 327 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 TTC28Q96AY4 2481 aa11.12□□□□□ -0.63
TPM3-207ENST00000341372 NCOR1O75376 2440 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 TBX10O75333 385 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 MICAL2O94851 1124 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 PRPF6O94906 941 aaKnown RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 ZNF202O95125 648 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 GJB6O95452 261 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 GLP2RO95838 553 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 NRIP1P48552 1158 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 TRIP4Q15650 581 aaPredicted RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 UPP1Q16831 310 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 LEXMQ3ZCV2 418 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 CD300LGQ6UXG3 332 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 TMEM184AQ6ZMB5 413 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 SYNPOQ8N3V7 929 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 GPR62Q9BZJ7 368 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 TLE6Q9H808 572 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 CAAP1Q9H8G2 361 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.637e-7■■■■■ 108.6
TPM3-207ENST00000341372 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 LINC01565O15544 149 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 KATNA1O75449 491 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 CYP3A5P20815 502 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 MRPS5P82675 430 aaKnown RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 DSG1Q02413 1049 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 TFF2Q03403 129 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 PPP2R3AQ06190 1150 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 AAK1Q2M2I8 961 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 KIAA0319Q5VV43 1072 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.11□□□□□ -0.63
TPM3-207ENST00000341372 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 POMGNT1Q8WZA1 660 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 PLD4Q96BZ4 506 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 ASB2Q96Q27 587 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 ASPSCR1Q9BZE9 553 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 ASB7Q9H672 318 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 GOLGA2P5Q9HBQ8 144 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 CLDND1Q9NY35 253 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 ZIM2Q9NZV7 527 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 SSX2IPQ9Y2D8 614 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 MAP4K5Q9Y4K4 846 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 XIRP2A4UGR9 3374 aa11.11□□□□□ -0.63
TPM3-207ENST00000341372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.1□□□□□ -0.63
TPM3-207ENST00000341372 LACTBL1A8MY62 500 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 CXCL14O95715 111 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 URODP06132 367 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 LRPAP1P30533 357 aa11.1□□□□□ -0.63
TPM3-207ENST00000341372 RPL9P32969 192 aaKnown RBP11.1□□□□□ -0.63
TPM3-207ENST00000341372 GLUD2P49448 558 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms