RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 PPP1R16BQ96T49 567 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 NCAPGQ9BPX3 1015 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 JPH2Q9BR39 696 aaPredicted RBP21.26■□□□□ 0.99
SPG7-202ENST00000341316 C22orf31O95567 290 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 NFICP08651 508 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 CDH5P33151 784 aaPredicted RBP21.26■□□□□ 0.99
SPG7-202ENST00000341316 CDH8P55286 799 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 ORC1Q13415 861 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 TFDP1Q14186 410 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 LONRF1Q17RB8 773 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 TMEM132AQ24JP5 1023 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 ATXN2LQ8WWM7 1075 aaKnown RBP21.26■□□□□ 0.99
SPG7-202ENST00000341316 CCT6BQ92526 530 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 ZNF317Q96PQ6 595 aaPredicted RBP21.26■□□□□ 0.99
SPG7-202ENST00000341316 IFT122Q9HBG6 1241 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 CYTH4Q9UIA0 394 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 ANAPC5Q9UJX4 755 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 PCDHGC3Q9UN70 934 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 MGAMO43451 1857 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 AGTP01019 485 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 TNNC2P02585 160 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 CYP2C8P10632 490 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 SLC26A2P50443 739 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 GLIS1Q8NBF1 620 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
SPG7-202ENST00000341316 SDCBP2Q9H190 292 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 HOMER3Q9NSC5 361 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 CHUKO15111 745 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 KRT19P08727 400 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 OSBPP22059 807 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 EIF4BP23588 611 aaKnown RBP21.25■□□□□ 0.99
SPG7-202ENST00000341316 CCDC38Q502W7 563 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 DCUN1D2Q6PH85 259 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 RCOR2Q8IZ40 523 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 FUKQ8N0W3 1084 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 ANKRD36BP1Q96IX9 119 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 TRAIPQ9BWF2 469 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 MROH8Q9H579 483 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 TNFSF13BQ9Y275 285 aa21.25■□□□□ 0.99
SPG7-202ENST00000341316 KRT1P04264 644 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 KLRC2P26717 231 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 ARHGAP1Q07960 439 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 TTLL4Q14679 1199 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 KYNUQ16719 465 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 PTPN20Q4JDL3 420 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 CYB5D1Q6P9G0 228 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 ERICH1Q86X53 443 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 C1orf127Q8N9H9 656 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 ZNF518BQ9C0D4 1074 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 DNPEPQ9ULA0 475 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 ANK1P16157 1881 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 INSRRP14616 1297 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 ATF7P17544 494 aaPredicted RBP21.24■□□□□ 0.99
SPG7-202ENST00000341316 SF3A3Q12874 501 aaKnown RBP eCLIP21.24■□□□□ 0.996e-7■□□□□ 10
SPG7-202ENST00000341316 ZFYVE27Q5T4F4 411 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 ZNF365Q70YC5 407 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 CCDC197Q8NCU1 140 aa21.24■□□□□ 0.99
SPG7-202ENST00000341316 RPF1Q9H9Y2 349 aaKnown RBP21.24■□□□□ 0.99
SPG7-202ENST00000341316 LACTBL1A8MY62 500 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 LIASO43766 372 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 TTC4O95801 387 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 WDR72Q3MJ13 1102 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 MFSD5Q6N075 450 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 ARMCX2Q7L311 632 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 FASTKD5Q7L8L6 764 aaKnown RBP21.23■□□□□ 0.99
SPG7-202ENST00000341316 PARP9Q8IXQ6 854 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 FBXO41Q8TF61 875 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 P3H4Q92791 437 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 TWNKQ96RR1 684 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 KDM4CQ9H3R0 1056 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 ERAP1Q9NZ08 941 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 HMGXB4Q9UGU5 601 aa21.23■□□□□ 0.99
SPG7-202ENST00000341316 CD19P15391 556 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 GSCP56915 257 aaPredicted RBP21.22■□□□□ 0.99
SPG7-202ENST00000341316 LACTBP83111 547 aaPredicted RBP21.22■□□□□ 0.99
SPG7-202ENST00000341316 AMHR2Q16671 573 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 IZUMO3Q5VZ72 239 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 SPOCD1Q6ZMY3 1216 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 CXorf38Q8TB03 319 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 RBM41Q96IZ5 413 aaKnown RBP21.22■□□□□ 0.99
SPG7-202ENST00000341316 CTNNAL1Q9UBT7 734 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 A0A087WZ62 844 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 FOXO6A8MYZ6 492 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 GOLGA8SH3BPF8 625 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 ZSCAN5DPP0CG00 497 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 RFC1P35251 1148 aaPredicted RBP21.22■□□□□ 0.99
SPG7-202ENST00000341316 RAD23BP54727 409 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 CAV1Q03135 178 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 LRRC38Q5VT99 294 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 TAPT1Q6NXT6 567 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 MAMDC4Q6UXC1 1216 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 EXOC3L1Q86VI1 746 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 LRRC34Q8IZ02 419 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 ARFGAP1Q8N6T3 406 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 CCDC89Q8N998 374 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 JOSD2Q8TAC2 188 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 CPB2Q96IY4 423 aa21.22■□□□□ 0.99
SPG7-202ENST00000341316 MYCBPQ99417 103 aaPredicted RBP21.22■□□□□ 0.99
SPG7-202ENST00000341316 FDXACB1Q9BRP7 624 aaPredicted RBP21.22■□□□□ 0.99
SPG7-202ENST00000341316 BCO2Q9BYV7 579 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms