RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PCDH10Q9P2E7 1040 aa15.47■□□□□ 0.07
NIPAL3-202ENST00000339255 PUF60Q9UHX1 559 aaKnown RBP15.47■□□□□ 0.07
NIPAL3-202ENST00000339255 MRPL42Q9Y6G3 142 aaKnown RBP15.47■□□□□ 0.07
NIPAL3-202ENST00000339255 A0A087X0T9 212 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 F8W810 466 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 I3L4J1 428 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 CAPN15O75808 1086 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 FAM228BP0C875 321 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 GZMAP12544 262 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 CD19P15391 556 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 IGFBP6P24592 240 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 YWHAHQ04917 246 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 FUT10Q6P4F1 479 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 THEM5Q8N1Q8 247 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 FIBCD1Q8N539 461 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 B3GALNT2Q8NCR0 500 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 SLC30A5Q8TAD4 765 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 SP7Q8TDD2 431 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 ZNF606Q8WXB4 792 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 IGSF21Q96ID5 467 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 HEXIM2Q96MH2 286 aaKnown RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 TWNKQ96RR1 684 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 OXCT2Q9BYC2 517 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 ACP6Q9NPH0 428 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 DDX43Q9NXZ2 648 aaKnown RBP15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 HCSTQ9UBK5 93 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 PCDHGC3Q9UN70 934 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
NIPAL3-202ENST00000339255 GBF1Q92538 1859 aa15.46■□□□□ 0.06
NIPAL3-202ENST00000339255 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 TLL1O43897 1013 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 OAZ2O95190 189 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 FMO1Q01740 532 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 GFPT1Q06210 699 aaPredicted RBP15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 ALKBH5Q6P6C2 394 aaKnown RBP15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 TOGARAM2Q6ZUX3 1019 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 ACOT1Q86TX2 421 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 COLGALT1Q8NBJ5 622 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 KIAA1524Q8TCG1 905 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 CLP1Q92989 425 aaKnown RBP15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 TMEM169Q96HH4 297 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 RNPC3Q96LT9 517 aaKnown RBP15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 ACBD6Q9BR61 282 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 PDCL3Q9H2J4 239 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 KCND1Q9NSA2 647 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 SPTLC3Q9NUV7 552 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 SEPT11Q9NVA2 429 aaKnown RBP15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 SPG21Q9NZD8 308 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 NAGPAQ9UK23 515 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 CDH9Q9ULB4 789 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 PYCARDQ9ULZ3 195 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 RWDD3Q9Y3V2 267 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 PCDHB12Q9Y5F1 795 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 ADGRG1Q9Y653 693 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 PTPRDP23468 1912 aa15.45■□□□□ 0.06
NIPAL3-202ENST00000339255 DDX3XO00571 662 aaKnown RBP eCLIP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 MMEP08473 750 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 CHRNB2P17787 502 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 FGFR3P22607 806 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 BRD2P25440 801 aaKnown RBP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 MAPRE1Q15691 268 aaKnown RBP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 CNGA2Q16280 664 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 TAF3Q5VWG9 929 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 SLC39A11Q8N1S5 342 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 OLIG1Q8TAK6 271 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 TFAP2BQ92481 460 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 ZNF518BQ9C0D4 1074 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 O00370 1275 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 EFEMP2O95967 443 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 LMO2P25791 158 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 MSNP26038 577 aaKnown RBP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 PBX3P40426 434 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 ARHGAP17Q68EM7 881 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 LCLAT1Q6UWP7 414 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 ANKS3Q6ZW76 656 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 OSTM1Q86WC4 334 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 LNX1Q8TBB1 728 aaPredicted RBP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 SYT15Q9BQS2 421 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 DESI2Q9BSY9 194 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 TTPALQ9BTX7 342 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 LHX5Q9H2C1 402 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 INTUQ9ULD6 942 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 NENFQ9UMX5 172 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 PPP2R2CQ9Y2T4 447 aa15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 TIMM13Q9Y5L4 95 aaPredicted RBP15.44■□□□□ 0.06
NIPAL3-202ENST00000339255 GOLGA6L9A6NEM1 432 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 PDGFRBP09619 1106 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 PTPN1P18031 435 aaKnown RBP15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 TKTP29401 623 aaKnown RBP15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 TSPY1Q01534 308 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 CYP27A1Q02318 531 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 ORC1Q13415 861 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 CLEC16AQ2KHT3 1053 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 CCDC122Q5T0U0 273 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 ZNF280DQ6N043 979 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 TMEM173Q86WV6 379 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms