RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MROH8Q9H579 483 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 AGO2Q9UKV8 859 aaKnown RBP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 MCM3APO60318 1980 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 ATP5HO75947 161 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 ATP6V1C1P21283 382 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 RWDD2BP57060 319 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 HSDL1Q3SXM5 330 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 FAM160B1Q5W0V3 765 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 METTL7BQ6UX53 244 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 CYP4X1Q8N118 509 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 SLCO2A1Q92959 643 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 LRRC19Q9H756 370 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 ANKFY1Q9P2R3 1169 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 NOCTQ9UK39 431 aaKnown RBP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 TNNI1P19237 187 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 FOXN2P32314 431 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 GTF2H1P32780 548 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 RAD23BP54727 409 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 GPC5P78333 572 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 LMNB2Q03252 620 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 MESDQ14696 234 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 TARBP2Q15633 366 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 TRIM50Q86XT4 487 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 FBXO16Q8IX29 292 aaPredicted RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 PSPC1Q8WXF1 523 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 MS4A4AQ96JQ5 239 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 LGALS13Q9UHV8 139 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 PDHXO00330 501 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 NEFHP12036 1026 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 YARSP54577 528 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 MRPS35P82673 323 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 SLC30A9Q6PML9 568 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 ENDOVQ8N8Q3 282 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 FAM13CQ8NE31 585 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 MORC4Q8TE76 937 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 TMEM237Q96Q45 408 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 FNBP1Q96RU3 617 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 MPHOSPH6Q99547 160 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 PITPNM3Q9BZ71 974 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 ETAA1Q9NY74 926 aa19.84■□□□□ 0.77
PSPC1-201ENST00000338910 ZNFX1Q9P2E3 1918 aaKnown RBP19.84■□□□□ 0.77
PSPC1-201ENST00000338910 CALCAP01258 141 aa19.83■□□□□ 0.77
PSPC1-201ENST00000338910 EDN1P05305 212 aa19.83■□□□□ 0.77
PSPC1-201ENST00000338910 ZBTB41Q5SVQ8 909 aa19.83■□□□□ 0.77
PSPC1-201ENST00000338910 TMEM63BQ5T3F8 832 aa19.83■□□□□ 0.77
PSPC1-201ENST00000338910 ERP27Q96DN0 273 aa19.83■□□□□ 0.77
PSPC1-201ENST00000338910 NKIRAS1Q9NYS0 192 aa19.83■□□□□ 0.77
PSPC1-201ENST00000338910 LRRC37A2A6NM11 1700 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 MTA2O94776 668 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 CETPP11597 493 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 CYP11B1P15538 503 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 ABCD1P33897 745 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 RFC5P40937 340 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 RNASELQ05823 741 aaKnown RBP19.83■□□□□ 0.76
PSPC1-201ENST00000338910 CAPSQ13938 189 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 KYNUQ16719 465 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 SEZ6Q53EL9 994 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 LMNTD2Q8IXW0 634 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 PRPF31Q8WWY3 499 aaKnown RBP19.83■□□□□ 0.76
PSPC1-201ENST00000338910 INPP5DQ92835 1189 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 KIAA1586Q9HCI6 787 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 CHKBQ9Y259 395 aa19.83■□□□□ 0.76
PSPC1-201ENST00000338910 CCL15-CCL14A0A0B4J2E2 113 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 BTBD19C9JJ37 291 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 NOP56O00567 594 aaKnown RBP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 HARSP12081 509 aaKnown RBP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 KRT5P13647 590 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 TUBP50607 506 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 KRT17Q04695 432 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 CCL15Q16663 113 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 PPP1R21Q6ZMI0 780 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 VSIG1Q86XK7 387 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 MSTO1Q9BUK6 570 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 STYXL1Q9Y6J8 313 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 NPTXRO95502 500 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 ITIH2P19823 946 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 IVDP26440 423 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 TARSP26639 723 aaKnown RBP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 PCK1P35558 622 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 FMO1Q01740 532 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 LBRQ14739 615 aaKnown RBP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 SETDB1Q15047 1291 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 SGSM1Q2NKQ1 1148 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 FAM47EQ6ZV65 393 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 ILDR2Q71H61 639 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 CPNE8Q86YQ8 564 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 APLFQ8IW19 511 aaPredicted RBP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 SRRM1Q8IYB3 904 aaKnown RBP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.82■□□□□ 0.76
PSPC1-201ENST00000338910 GPRC5AQ8NFJ5 357 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 COPS5Q92905 334 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 NUDCD1Q96RS6 583 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 TSC22D3Q99576 134 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 STARD13Q9Y3M8 1113 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 ACTL7BQ9Y614 415 aa19.82■□□□□ 0.76
PSPC1-201ENST00000338910 LRRD1A4D1F6 860 aa19.81■□□□□ 0.76
PSPC1-201ENST00000338910 TTLL13PA6NNM8 815 aa19.81■□□□□ 0.76
PSPC1-201ENST00000338910 ATMINO43313 823 aaPredicted RBP19.81■□□□□ 0.76
PSPC1-201ENST00000338910 AP1G2O75843 785 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms