RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 GALNT16Q8N428 558 aa3.42□□□□□ -1.86
XRCC4-202ENST00000338635 KLHDC4Q8TBB5 520 aa3.42□□□□□ -1.86
XRCC4-202ENST00000338635 SCAMP4Q969E2 229 aa3.42□□□□□ -1.86
XRCC4-202ENST00000338635 FAM136AQ96C01 138 aa3.42□□□□□ -1.86
XRCC4-202ENST00000338635 MRGPRX4Q96LA9 322 aa3.42□□□□□ -1.86
XRCC4-202ENST00000338635 C5orf34Q96MH7 638 aa3.42□□□□□ -1.86
XRCC4-202ENST00000338635 CCDC187A0A096LP49 1063 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 H0YIZ8 118 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 PDHA1P08559 390 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 CYP2C18P33260 490 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 SOX5P35711 763 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 EEFSECP57772 596 aaKnown RBP3.41□□□□□ -1.86
XRCC4-202ENST00000338635 RAB39AQ14964 217 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 PCID2Q5JVF3 399 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 ZNF804AQ7Z570 1209 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 CHSY1Q86X52 802 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 PNLDC1Q8NA58 520 aaKnown RBP3.41□□□□□ -1.86
XRCC4-202ENST00000338635 PSD4Q8NDX1 1056 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 PRSS3P2Q8NHM4 247 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 HDAC10Q969S8 669 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 CLPTM1LQ96KA5 538 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 ETAA1Q9NY74 926 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 DLL3Q9NYJ7 618 aa3.41□□□□□ -1.86
XRCC4-202ENST00000338635 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 PPM1DO15297 605 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 SGTAO43765 313 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 SOAT2O75908 522 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 ITGALP20701 1170 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 CD6P30203 668 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 PSMC1P62191 440 aaKnown RBP3.4□□□□□ -1.87
XRCC4-202ENST00000338635 HOXA4Q00056 320 aaPredicted RBP3.4□□□□□ -1.87
XRCC4-202ENST00000338635 TLE1Q04724 770 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 IL10RAQ13651 578 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 LRRC41Q15345 812 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 TAF7LQ5H9L4 462 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 ZNF618Q5T7W0 954 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 MIS18BP1Q6P0N0 1132 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 LHFPL2Q6ZUX7 228 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 PDSS2Q86YH6 399 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 AMOTL1Q8IY63 956 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 NANOGP1Q8N7R0 232 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 C8orf58Q8NAV2 365 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 ASB2Q96Q27 587 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 BRD9Q9H8M2 597 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 SERHLQ9NQF3 203 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 PDGFCQ9NRA1 345 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 MRPS18AQ9NVS2 196 aaKnown RBP3.4□□□□□ -1.87
XRCC4-202ENST00000338635 WWOXQ9NZC7 414 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 CALCOCO1Q9P1Z2 691 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 AFG3L2Q9Y4W6 797 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 FNDC1Q4ZHG4 1894 aaPredicted RBP3.4□□□□□ -1.87
XRCC4-202ENST00000338635 WASHC2AQ641Q2 1341 aa3.4□□□□□ -1.87
XRCC4-202ENST00000338635 PRR23D1E9PI22 279 aaPredicted RBP3.39□□□□□ -1.87
XRCC4-202ENST00000338635 VPS4BO75351 444 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 PRR23D2P0DMB1 279 aaPredicted RBP3.39□□□□□ -1.87
XRCC4-202ENST00000338635 LINC00205P59089 165 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 ERVK-21P61565 698 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 HABP2Q14520 560 aaPredicted RBP3.39□□□□□ -1.87
XRCC4-202ENST00000338635 CLUL1Q15846 466 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 MIDNQ504T8 468 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 CCDC93Q567U6 631 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 TEDDM1Q5T9Z0 273 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 VPS53Q5VIR6 699 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 NAPRTQ6XQN6 538 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 IRF2BP2Q7Z5L9 587 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 WDR53Q7Z5U6 358 aaPredicted RBP3.39□□□□□ -1.87
XRCC4-202ENST00000338635 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 FAM109AQ8N4B1 249 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 AFAP1L2Q8N4X5 818 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 NSMCE1Q8WV22 266 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 DMRTA2Q96SC8 542 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.39□□□□□ -1.87
XRCC4-202ENST00000338635 WDR17Q8IZU2 1322 aa3.39□□□□□ -1.87
XRCC4-202ENST00000338635 ZNF785A8K8V0 405 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 SOCS2O14508 198 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 ENPP3O14638 875 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 NDUFS2O75306 463 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 EYA4O95677 639 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 GJB1P08034 283 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CHRM3P20309 590 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CYP4F2P78329 520 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 Q4G0T1 1027 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CT47A1Q5JQC4 288 aaPredicted RBP3.38□□□□□ -1.87
XRCC4-202ENST00000338635 COG1Q8WTW3 980 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CHAC2Q8WUX2 184 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CNPPD1Q9BV87 410 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 TRNAU1APQ9NX07 287 aaKnown RBP3.38□□□□□ -1.87
XRCC4-202ENST00000338635 TUBD1Q9UJT1 453 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 LIMCH1Q9UPQ0 1083 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 RAD54BQ9Y620 910 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 F2RL2O00254 374 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 GPR39O43194 453 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 BCAR3O75815 825 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CPEP16870 476 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 ENGP17813 658 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 CYP2C19P33261 490 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 LIPAP38571 399 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 ZNF135P52742 658 aaPredicted RBP3.38□□□□□ -1.87
XRCC4-202ENST00000338635 MRPL10Q7Z7H8 261 aaKnown RBP3.38□□□□□ -1.87
XRCC4-202ENST00000338635 NRACQ8N912 160 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms