RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 JRKLQ9Y4A0 524 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 GRID2IPA4D2P6 1211 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 LSM8O95777 96 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 LMO2P25791 158 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 WSCD1Q658N2 575 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 ZNF280BQ86YH2 543 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 RHOT2Q8IXI1 618 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 HASPINQ8TF76 798 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 UROC1Q96N76 676 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 C11orf70Q9BRQ4 267 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 TANC1Q9C0D5 1861 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 DPEP3Q9H4B8 488 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 ADAM22Q9P0K1 906 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 KANSL3Q9P2N6 904 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 CNOT8Q9UFF9 292 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 GTF3C4Q9UKN8 822 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 PCDHGC5Q9Y5F6 944 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.6■□□□□ 0.09
CBX3-201ENST00000337620 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
CBX3-201ENST00000337620 DDHD2O94830 711 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 MICAL2O94851 1124 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 FTCDO95954 541 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 CNGA2Q16280 664 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 MMS22LQ6ZRQ5 1243 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 LIMS2Q7Z4I7 341 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 WDTC1Q8N5D0 677 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 TRIM11Q96F44 468 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 ZNF518BQ9C0D4 1074 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 FAM49BQ9NUQ9 324 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.6■□□□□ 0.09
CBX3-201ENST00000337620 COG5Q9UP83 839 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 STXBP5LQ9Y2K9 1186 aa15.6■□□□□ 0.09
CBX3-201ENST00000337620 M0QYV0 167 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 O00370 1275 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 CYP1A2P05177 515 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 LIN9Q5TKA1 542 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 PPP1R2P3Q6NXS1 205 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 FAM43BQ6ZT52 329 aaPredicted RBP15.59■□□□□ 0.09
CBX3-201ENST00000337620 MON1BQ7L1V2 547 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 DAAM2Q86T65 1068 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 PHF13Q86YI8 300 aaPredicted RBP15.59■□□□□ 0.09
CBX3-201ENST00000337620 FAM193BQ96PV7 902 aaPredicted RBP15.59■□□□□ 0.09
CBX3-201ENST00000337620 LPIN3Q9BQK8 851 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 NUP85Q9BW27 656 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 LHX5Q9H2C1 402 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 GOLPH3Q9H4A6 298 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 TBC1D13Q9NVG8 400 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 TIMM13Q9Y5L4 95 aaPredicted RBP15.59■□□□□ 0.09
CBX3-201ENST00000337620 I3L4J1 428 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 NCK2O43639 380 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 MYBL1P10243 752 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 WARSP23381 471 aaKnown RBP15.59■□□□□ 0.09
CBX3-201ENST00000337620 RRM1P23921 792 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 GATMP50440 423 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 PTPROQ16827 1216 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 TIGD5Q53EQ6 642 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 PPP1R26Q5T8A7 1209 aaPredicted RBP15.59■□□□□ 0.09
CBX3-201ENST00000337620 DCLRE1AQ6PJP8 1040 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 OSTM1Q86WC4 334 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 ERICH1Q86X53 443 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 UBA3Q8TBC4 463 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 DNAI2Q9GZS0 605 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 TSPAN16Q9UKR8 245 aa15.59■□□□□ 0.09
CBX3-201ENST00000337620 TRIM43BA6NCK2 446 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 B4GALT3O60512 393 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 MMP8P22894 467 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 CDH5P33151 784 aaPredicted RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 BRCC3P46736 316 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 OR1G1P47890 313 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 IKBKEQ14164 716 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 LLGL2Q6P1M3 1020 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 LRRC57Q8N9N7 239 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 ZNF564Q8TBZ8 553 aaPredicted RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 TRIM43Q96BQ3 446 aaPredicted RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 VCPIP1Q96JH7 1222 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 F8W810 466 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 BUB1BO60566 1050 aaPredicted RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 UPP2O95045 317 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 TIMP1P01033 207 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 RAG1P15918 1043 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 CAPN2P17655 700 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 EN2P19622 333 aaPredicted RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 ACAT1P24752 427 aaKnown RBP15.58■□□□□ 0.08
CBX3-201ENST00000337620 ITGB8P26012 769 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 STILQ15468 1287 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 GOLGA7BQ2TAP0 167 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 CNKSR3Q6P9H4 555 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 LCLAT1Q6UWP7 414 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 SYCE1Q8N0S2 351 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 TNIP3Q96KP6 325 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 CASD1Q96PB1 797 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 L2HGDHQ9H9P8 463 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 UVRAGQ9P2Y5 699 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 CYTH4Q9UIA0 394 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 SAR1BQ9Y6B6 198 aa15.58■□□□□ 0.08
CBX3-201ENST00000337620 SRGAP2O75044 1071 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 KIF4AO95239 1232 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 ITGB1P05556 798 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms