RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NCDNQ9UBB6 729 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 TICRRQ7Z2Z1 1910 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 HUS1O60921 280 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 SOAT2O75908 522 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 VNN2O95498 520 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 CCNE1P24864 410 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 CDC25CP30307 473 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 MTAPQ13126 283 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 LRRC32Q14392 662 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 SLC39A14Q15043 492 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 STK38Q15208 465 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 CRELD2Q6UXH1 353 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-202ENST00000337571 ERMP1Q7Z2K6 904 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 TMC8Q8IU68 726 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 OR10T2Q8NGX3 314 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 GIPC2Q8TF65 315 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 DNAJC19Q96DA6 116 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 DNAJC25Q9H1X3 360 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 C8orf33Q9H7E9 229 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-202ENST00000337571 OLFML3Q9NRN5 406 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 ABI2Q9NYB9 513 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-202ENST00000337571 RBAKQ9NYW8 714 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-202ENST00000337571 ZMYM5Q9UJ78 669 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 PCDHB5Q9Y5E4 795 aa11.49□□□□□ -0.57
CAPN3-202ENST00000337571 FANCMQ8IYD8 2048 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-202ENST00000337571 DMXL1Q9Y485 3027 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-202ENST00000337571 STX6O43752 255 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 EXTL3O43909 919 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 ITGB3P05106 788 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 KRT19P08727 400 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 GARTP22102 1010 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 ADSSP30520 456 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 CCR3P51677 355 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 CDR1P51861 262 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 AMPD3Q01432 767 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 MYL7Q01449 175 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 KCNA1Q09470 495 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 FCHO2Q0JRZ9 810 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 FZD5Q13467 585 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 NFE2Q16621 373 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-202ENST00000337571 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-202ENST00000337571 TSSK4Q6SA08 328 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 EFCAB13Q8IY85 973 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 TTC9BQ8N6N2 239 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 GPR161Q8N6U8 529 aaKnown RBP11.48□□□□□ -0.57
CAPN3-202ENST00000337571 PDILTQ8N807 584 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 SAAL1Q96ER3 474 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 ZNF396Q96N95 335 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-202ENST00000337571 USP28Q96RU2 1077 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 LPIN3Q9BQK8 851 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 CHRDQ9H2X0 955 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 TASP1Q9H6P5 420 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 RAB23Q9ULC3 237 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 SCN1AP35498 2009 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 CACNA1IQ9P0X4 2223 aa11.48□□□□□ -0.57
CAPN3-202ENST00000337571 ZNF292O60281 2723 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 GOLGA8IPA6NC78 632 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 GOLGA8JA6NMD2 632 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 SLC38A8A6NNN8 435 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 KIAA0391O15091 583 aaKnown RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 PRPF40AO75400 957 aaKnown RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 TMEM191BP0C7N4 346 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 AVPR1AP37288 418 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 CXCL12P48061 93 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 RPL10AP62906 217 aaKnown RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 RBP5P82980 135 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 BFSP1Q12934 665 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 MYO1EQ12965 1108 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 SURF1Q15526 300 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 STXBP5Q5T5C0 1151 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 GAREM2Q75VX8 874 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 LRRTM3Q86VH5 581 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 RALGPS2Q86X27 583 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 BRSK2Q8IWQ3 736 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 TMEM86AQ8N2M4 240 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 DCLK2Q8N568 766 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 CELF5Q8N6W0 485 aaKnown RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 SUMF1Q8NBK3 374 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 ZBTB44Q8NCP5 570 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 BPIFB1Q8TDL5 484 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 PCIF1Q9H4Z3 704 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 OBP2AQ9NY56 170 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 MTMR6Q9Y217 621 aa11.47□□□□□ -0.57
CAPN3-202ENST00000337571 MORC2Q9Y6X9 1032 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-202ENST00000337571 ZNF233A6NK53 670 aa11.46□□□□□ -0.57
CAPN3-202ENST00000337571 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms