RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ACAD11Q709F0 780 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 TRIM50Q86XT4 487 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 FLAD1Q8NFF5 587 aa13.87□□□□□ -0.19
COL2A1-201ENST00000337299 DNAAF2Q9NVR5 837 aaKnown RBP13.87□□□□□ -0.19
COL2A1-201ENST00000337299 A0A1B0GVG6 124 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 MED24O75448 989 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 CCR3P51677 355 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 CATSPER3Q86XQ3 398 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 CLVS1Q8IUQ0 354 aaPredicted RBP13.86□□□□□ -0.19
COL2A1-201ENST00000337299 CMTM5Q96DZ9 223 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 ZNF317Q96PQ6 595 aaPredicted RBP13.86□□□□□ -0.19
COL2A1-201ENST00000337299 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 TDRKHQ9Y2W6 561 aaKnown RBP13.86□□□□□ -0.19
COL2A1-201ENST00000337299 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
COL2A1-201ENST00000337299 PROCP04070 461 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 PAEPP09466 180 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 SERPINB5P36952 375 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 CASP7P55210 303 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 TBL3Q12788 808 aaKnown RBP13.86□□□□□ -0.19
COL2A1-201ENST00000337299 COG2Q14746 738 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 NLRX1Q86UT6 975 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 IFNEQ86WN2 208 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 CATSPER1Q8NEC5 780 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 OR6Y1Q8NGX8 325 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 ADNPQ9H2P0 1102 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 SAR1AQ9NR31 198 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 ETNK2Q9NVF9 386 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 ZNF180Q9UJW8 692 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 FOXP2O15409 715 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 PEX11AO75192 247 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 KLHL2O95198 593 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 RTP1P59025 263 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 KCNA1Q09470 495 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 PDK3Q15120 406 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 FBXL13Q8NEE6 735 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 GID8Q9NWU2 228 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 GTF3C4Q9UKN8 822 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 AFG3L2Q9Y4W6 797 aa13.86□□□□□ -0.19
COL2A1-201ENST00000337299 TCRBV5S4A2TA0A5A2 114 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 A8MXQ7 604 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 STMN1P16949 149 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 RRM1P23921 792 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 KLRK1P26718 216 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 MORF4L2Q15014 288 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 OR6B2Q6IFH4 312 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CEP170P1Q96L14 293 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 STX18Q9P2W9 335 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CHKBQ9Y259 395 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 GOLGA8QA0A0J9YX86 632 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 GOLGA8OA6NCC3 632 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 GOLGA8NF8WBI6 632 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 XPOTO43592 962 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CST8O60676 142 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 PSMC6P62333 389 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 TTC33Q6PID6 262 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 SLC47A2Q86VL8 602 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 HEATR4Q86WZ0 1026 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 WDR11Q9BZH6 1224 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 ARHGEF28Q8N1W1 1705 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 TCRBV7S2A1N4TA0A589 114 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 WTIPA6NIX2 430 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 E9PBE3 544 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 GSC2O15499 205 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 PRPSAP2O60256 369 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 KLHL41O60662 606 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 ZMPSTE24O75844 475 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 HSPA8P11142 646 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 SKIV2L2P42285 1042 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CDK16Q00536 496 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 FOXD4Q12950 439 aaPredicted RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CBX3Q13185 183 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CNPY1Q3B7I2 92 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CEP55Q53EZ4 464 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 GPR141Q7Z602 305 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 CLNKQ7Z7G1 428 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 FAM71DQ8N9W8 422 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 SLC35C1Q96A29 364 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 ARHGEF38Q9NXL2 777 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 DNAJC16Q9Y2G8 782 aa13.85□□□□□ -0.19
COL2A1-201ENST00000337299 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
COL2A1-201ENST00000337299 A0A1W2PPM1 405 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 ARHGEF37A1IGU5 675 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 ABLIM1O14639 778 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 NKRFO15226 690 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 MGEA5O60502 916 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 OCM2P0CE71 109 aa13.84□□□□□ -0.19
COL2A1-201ENST00000337299 OCMP0CE72 109 aaPredicted RBP13.84□□□□□ -0.19
COL2A1-201ENST00000337299 TRPC1P48995 793 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms