RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 BOLA3Q53S33 107 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 COG1Q8WTW3 980 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 SGSM3Q96HU1 749 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 PDK2Q15119 407 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 AGAP9Q5VTM2 703 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 SEPT5Q99719 369 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 CYP2D6P10635 497 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 MAPK1P28482 360 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 GUCY1A2P33402 732 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 EPHB3P54753 998 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 INHBEP58166 350 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 ZNF200P98182 395 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 KBTBD12Q3ZCT8 623 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 IRAK1BP1Q5VVH5 260 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 C3orf20Q8ND61 904 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 PRDM16Q9HAZ2 1276 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 UBQLN1Q9UMX0 589 aaKnown RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 STRNO43815 780 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 BCAT1P54687 386 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 SNAP25P60880 206 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 BAATQ14032 418 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 SLC13A1Q9BZW2 595 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 XPO7Q9UIA9 1087 aaKnown RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 LNPEPQ9UIQ6 1025 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 OPLAHO14841 1288 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 GNRH1P01148 92 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 PDGFRAP16234 1089 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 ITGA9Q13797 1035 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 RBBP8Q99708 897 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 TBC1D12O60347 775 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 ARFIP2P53365 341 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 SKOR1P84550 965 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 GLYCTKQ8IVS8 523 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 BBS7Q8IWZ6 715 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 PLEKHA8Q96JA3 519 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 GUCA1CO95843 209 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 AP1ARQ63HQ0 302 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ANKS6Q68DC2 871 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 MRNIPQ6NTE8 343 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ZCCHC2Q9C0B9 1178 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 CDYLQ9Y232 598 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 SOAT2O75908 522 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 C16orf87Q6PH81 154 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ZC3H18Q86VM9 953 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 ZC3H7BQ9UGR2 993 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 HIC1Q14526 733 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 MGAT5BQ3V5L5 792 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 FAM133BQ5BKY9 247 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 WDCPQ9H6R7 721 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 TMEM161AQ9NX61 479 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ARHGAP23Q9P227 1491 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 TRPC5OSA6NMA1 111 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 UXTQ9UBK9 157 aaPredicted RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 F5H5T6 163 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 LSM8O95777 96 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 NR3C2P08235 984 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 AKR1B1P15121 316 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 PSMA4P25789 261 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 ZC4H2Q9NQZ6 224 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 TRAF3IP3Q9Y228 551 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 ZNF839A8K0R7 811 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 SYNCRIPO60506 623 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 AGTP01019 485 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 CHGBP05060 677 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 OAZ1P54368 228 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 CNTN1Q12860 1018 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 PKP1Q13835 747 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 UNC45BQ8IWX7 931 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 SLC44A5Q8NCS7 719 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 MRPL9Q9BYD2 267 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 BRD8Q9H0E9 1235 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 EHD4Q9H223 541 aa12.79□□□□□ -0.36
FN1-202ENST00000336916 DRG1Q9Y295 367 aaKnown RBP12.79□□□□□ -0.36
FN1-202ENST00000336916 HAUS5O94927 633 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 GPD1P21695 349 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 RENBPP51606 427 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 BACE1P56817 501 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 MAGOHP61326 146 aaKnown RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 ZNF544Q6NX49 715 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 STAMBPL1Q96FJ0 436 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 CYP3A43Q9HB55 503 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 RAB6BQ9NRW1 208 aa12.78□□□□□ -0.36
FN1-202ENST00000336916 RRP15Q9Y3B9 282 aaKnown RBP12.78□□□□□ -0.36
FN1-202ENST00000336916 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms