RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 FXR2P51116 673 aaKnown RBP eCLIP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 HNRNPH2P55795 449 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FAM110CQ1W6H9 321 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 PAN2Q504Q3 1202 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CTU1Q7Z7A3 348 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ARHGEF2Q92974 986 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 HPDLQ96IR7 371 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 SAMSN1Q9NSI8 373 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ABI2Q9NYB9 513 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 DDX41Q9UJV9 622 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ANAPC7Q9UJX3 599 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CLUHO75153 1309 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SF3B1O75533 1304 aaKnown RBP eCLIP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 LTBP4Q8N2S1 1624 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 C2orf81A6NN90 581 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 CHUKO15111 745 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 RTN2O75298 545 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 NDUFS3O75489 264 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 PGK2P07205 417 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 CDC25CP30307 473 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 KRT20P35900 424 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 RBBP7Q16576 425 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 STX19Q8N4C7 294 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TINF2Q9BSI4 451 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ELOVL4Q9GZR5 314 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 BRD8Q9H0E9 1235 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 UNC45AQ9H3U1 944 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 RPRD1BQ9NQG5 326 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 RSPH14Q9UHP6 348 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 PRG3Q9Y2Y8 225 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ATP2C2O75185 946 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 HALP42357 657 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ALDH5A1P51649 535 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 COPS2P61201 443 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 EDRF1Q3B7T1 1238 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 C6orf118Q5T5N4 469 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TTC17Q96AE7 1141 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 RNPC3Q96LT9 517 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 PRPF18Q99633 342 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 UPF3AQ9H1J1 476 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 COG4Q9H9E3 785 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 COPS7BQ9H9Q2 264 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ASAH2Q9NR71 780 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 LNPEPQ9UIQ6 1025 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SLC39A10Q9ULF5 831 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 DOT1LQ8TEK3 1739 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SPDYE5A6NIY4 337 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 NFIBO00712 420 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ENC1O14682 589 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 BUB1O43683 1085 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SUPT3HO75486 399 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 VDRP11473 427 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ITGB6P18564 788 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 CYP11B2P19099 503 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 GCLMP48507 274 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 BCAT1P54687 386 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 MRPS6P82932 125 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 LBRQ14739 615 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SPDYE7PQ495Y7 208 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SLC27A1Q6PCB7 646 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ADGRF2Q8IZF7 708 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 GPR63Q9BZJ6 419 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 RSAD1Q9HA92 442 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 COL16A1Q07092 1604 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 NHSL1Q5SYE7 1610 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 H3BRB1 525 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 UBXN8O00124 270 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 IFRD1O00458 451 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 MTA2O94776 668 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ELF2Q15723 593 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 GOLGA7BQ2TAP0 167 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ANKRD40Q6AI12 368 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SLC26A7Q8TE54 656 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TMEM143Q96AN5 459 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SH2D3AQ9BRG2 576 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ZNF518BQ9C0D4 1074 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SIK2Q9H0K1 926 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TUT1Q9H6E5 874 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 C11orf49Q9H6J7 331 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ABCF3Q9NUQ8 709 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 SPG21Q9NZD8 308 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 THEGQ9P2T0 379 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 STRCQ7RTU9 1775 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TTC36A6NLP5 189 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 MEI4A8MW99 385 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 VWA5AO00534 786 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ZNF263O14978 683 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 POLR2LP62875 67 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 FASTKD1Q53R41 847 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 NAPEPLDQ6IQ20 393 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ZNF564Q8TBZ8 553 aaPredicted RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 PIK3R5Q8WYR1 880 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 P2RX7Q99572 595 aaKnown RBP7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TRAIPQ9BWF2 469 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 ADGRE3Q9BY15 652 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 TMEM60Q9H2L4 133 aa7.69□□□□□ -1.18
EPHA3-201ENST00000336596 HEATR9A2RTY3 570 aa7.68□□□□□ -1.18
EPHA3-201ENST00000336596 GRID2IPA4D2P6 1211 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms