RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 DDX27Q96GQ7 796 aaKnown RBP13.33□□□□□ -0.28
LIMK1-201ENST00000336180 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
LIMK1-201ENST00000336180 SEMA4AQ9H3S1 761 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 MED4Q9NPJ6 270 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
LIMK1-201ENST00000336180 PARP2Q9UGN5 583 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 LRRD1A4D1F6 860 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 PROSCO94903 275 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 KRT1P04264 644 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 CD48P09326 243 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 CTGFP29279 349 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 NDST1P52848 882 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 RAD23BP54727 409 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
LIMK1-201ENST00000336180 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 ZDHHC24Q6UX98 284 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 IQCKQ8N0W5 287 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 NETO2Q8NC67 525 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 FEZF2Q8TBJ5 459 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 KAT2BQ92831 832 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 ACAP3Q96P50 834 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 OSBPL7Q9BZF2 842 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 ABHD16BQ9H3Z7 469 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 VIPAS39Q9H9C1 493 aa13.33□□□□□ -0.28
LIMK1-201ENST00000336180 CES2O00748 559 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 ODF2Q5BJF6 829 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 DPP3Q9NY33 737 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 LRRC37A2A6NM11 1700 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 ACSL3O95573 720 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 ERBB2P04626 1255 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 C6orf222P0C671 652 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 MMP8P22894 467 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 CHKAP35790 457 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 AFF1P51825 1210 aaKnown RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 PLCB3Q01970 1234 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 IFFO1Q0D2I5 559 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 TMC3Q7Z5M5 1100 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 SLC4A11Q8NBS3 891 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 MRPL45Q9BRJ2 306 aaKnown RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 MAGEB5Q9BZ81 275 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 MIS12Q9H081 205 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 DPEP3Q9H4B8 488 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 STRNO43815 780 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 IFNB1P01574 187 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 CYP3A5P20815 502 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 SLC26A2P50443 739 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 ZNF132P52740 706 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 GNGT1P63211 74 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 ATP11AP98196 1134 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 NFX1Q12986 1120 aaKnown RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 FAM110CQ1W6H9 321 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 KRT71Q3SY84 523 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 GSTA5Q7RTV2 222 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 NDRG1Q92597 394 aaKnown RBP13.32□□□□□ -0.28
LIMK1-201ENST00000336180 HSPH1Q92598 858 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 GRHL1Q9NZI5 618 aa13.32□□□□□ -0.28
LIMK1-201ENST00000336180 KAT6AQ92794 2004 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 GOLGA8MH3BSY2 632 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 MICAL2O94851 1124 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 PSMA2P25787 234 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 HOXA11P31270 313 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-201ENST00000336180 C15orf59Q2T9L4 293 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-201ENST00000336180 TMEM35BQ8NCS4 154 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 B3GNT5Q9BYG0 378 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 CALCOCO1Q9P1Z2 691 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 MORF4L1Q9UBU8 362 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 NOVA2Q9UNW9 492 aaKnown RBP13.31□□□□□ -0.28
LIMK1-201ENST00000336180 B4GALT4O60513 344 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 ZNF844Q08AG5 666 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 UBR7Q8N806 425 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 NAP1L3Q99457 506 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-201ENST00000336180 ADPGKQ9BRR6 497 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
LIMK1-201ENST00000336180 TRIP12Q14669 1992 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 TTC36A6NLP5 189 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 TNPO2O14787 897 aaKnown RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 CTNNA2P26232 953 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 IL1R2P27930 398 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 HADHBP55084 474 aaKnown RBP13.3□□□□□ -0.28
LIMK1-201ENST00000336180 MDM1Q8TC05 714 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 SLC5A4Q9NY91 659 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
LIMK1-201ENST00000336180 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms