RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 TRAIPQ9BWF2 469 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 TRIM6Q9C030 488 aaPredicted RBP14.31□□□□□ -0.12
LMO1-201ENST00000335790 CXCL16Q9H2A7 254 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
LMO1-201ENST00000335790 GDAP2Q9NXN4 497 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 IP6K2Q9UHH9 426 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 IPPQ9Y573 584 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 CDY2AQ9Y6F7 541 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 GRIN2DO15399 1336 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 TMEM110-MUSTN1A8MSY1 372 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 FSCN2O14926 492 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 TLR3O15455 904 aaKnown RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 RAD51CO43502 376 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 CABYRO75952 493 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 ASGR1P07306 291 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 GLI1P08151 1106 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 MYBL2P10244 700 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 PYGMP11217 842 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 ATF7P17544 494 aaPredicted RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 LRPAP1P30533 357 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 PNPLA4P41247 253 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 PLA2G4AP47712 749 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 EPHB4P54760 987 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 RNASE9P60153 205 aaKnown RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 NNTQ13423 1086 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 ZNF268Q14587 947 aaPredicted RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 KCNA10Q16322 511 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 FAM26DQ5JW98 314 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 SEL1L2Q5TEA6 688 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 LRRC38Q5VT99 294 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 LCLAT1Q6UWP7 414 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 CPNE8Q86YQ8 564 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 KRT222Q8N1A0 295 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 CCDC26Q8TAB7 109 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 FNIP1Q8TF40 1166 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 CAVIN3Q969G5 261 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
LMO1-201ENST00000335790 PLVAPQ9BX97 442 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 TRIM7Q9C029 511 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 TUBGCP4Q9UGJ1 667 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 HMGXB4Q9UGU5 601 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 HES2Q9Y543 173 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 SQORQ9Y6N5 450 aa14.3□□□□□ -0.12
LMO1-201ENST00000335790 SIGLEC16A6NMB1 481 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 MICAL2O94851 1124 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 HEXIM1O94992 359 aaKnown RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 CHRNA1P02708 482 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 ITGA4P13612 1032 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 CD19P15391 556 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 GPD2P43304 727 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 NDST1P52848 882 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 SLC7A5Q01650 507 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 ZNF211Q13398 564 aaPredicted RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 DHX34Q14147 1143 aaKnown RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 SIX1Q15475 284 aaPredicted RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 PTPN20Q4JDL3 420 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 SGO2Q562F6 1265 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 EMBQ6PCB8 327 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 MAATS1Q7Z4T9 603 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 MRPL10Q7Z7H8 261 aaKnown RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 SLC13A5Q86YT5 568 aaPredicted RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 KATNAL2Q8IYT4 538 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 C12orf50Q8NA57 414 aaPredicted RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 WNT8BQ93098 351 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 C18orf25Q96B23 403 aaPredicted RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 ZNF560Q96MR9 790 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 RUNDC3BQ96NL0 473 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 AP1M1Q9BXS5 423 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 DDX20Q9UHI6 824 aaKnown RBP14.29□□□□□ -0.12
LMO1-201ENST00000335790 CYTH4Q9UIA0 394 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
LMO1-201ENST00000335790 NR2E1Q9Y466 385 aa14.29□□□□□ -0.12
LMO1-201ENST00000335790 GOLGA6L10A0A0M3HER8 536 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 FAM170AA1A519 330 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 PPEF2O14830 753 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 ZNF623O75123 536 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 PHF2O75151 1096 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 CAND2O75155 1236 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 ZMYND10O75800 440 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 SETSIPP0DME0 302 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 ELNP15502 786 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 AKAP5P24588 427 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 CHRNA3P32297 505 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 ZNF252P-AS1Q0IIN9 211 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 PAK2Q13177 524 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 PTK7Q13308 1070 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 PIGHQ14442 188 aaPredicted RBP14.28□□□□□ -0.12
LMO1-201ENST00000335790 CASP8Q14790 479 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 TRIM71Q2Q1W2 868 aaKnown RBP14.28□□□□□ -0.12
LMO1-201ENST00000335790 PKDCCQ504Y2 493 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 C2CD6Q53TS8 623 aa14.28□□□□□ -0.12
LMO1-201ENST00000335790 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms