RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 ASB16Q96NS5 453 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 DDX23Q9BUQ8 820 aaKnown RBP12.08□□□□□ -0.48
C9orf85-201ENST00000334731 FOXQ1Q9C009 403 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 MTMR12Q9C0I1 747 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 GPR88Q9GZN0 384 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 DLGAP2Q9P1A6 1054 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 SIX4Q9UIU6 781 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 ASB3Q9Y575 518 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 A0A1W2PRU2 124 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 KANSL1LA0AUZ9 987 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 KRT19P08727 400 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 VIPR2P41587 438 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 PRKCQQ04759 706 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 SMARCB1Q12824 385 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 MLF2Q15773 248 aaPredicted RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 LMBRD2Q68DH5 695 aaPredicted RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 GAREM2Q75VX8 874 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 ITIH5Q86UX2 942 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 NELFCDQ8IXH7 590 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 DCP1BQ8IZD4 617 aaKnown RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 LRRC52Q8N7C0 313 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 OR5B17Q8NGF7 314 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 ZSCAN18Q8TBC5 510 aaPredicted RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 C2orf15Q8WU43 125 aaKnown RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 LEO1Q8WVC0 666 aaPredicted RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 PSMG2Q969U7 264 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 PAGE5Q96GU1 130 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 SEPT5Q99719 369 aaPredicted RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 TRPV4Q9HBA0 871 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 KIAA1586Q9HCI6 787 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 ZNF334Q9HCZ1 680 aaPredicted RBP12.07□□□□□ -0.48
C9orf85-201ENST00000334731 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 AGPAT3Q9NRZ7 376 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 GDAP2Q9NXN4 497 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 SERTAD1Q9UHV2 236 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 PTPRJQ12913 1337 aa12.07□□□□□ -0.48
C9orf85-201ENST00000334731 CLIC2O15247 247 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 HUS1O60921 280 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 LRRN2O75325 713 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 TMEM191BP0C7N4 346 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 HAPLN1P10915 354 aaPredicted RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 GLULP15104 373 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 PSMC3P17980 439 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 ATF6P18850 670 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 CD72P21854 359 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 CMA1P23946 247 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 SNRPFP62306 86 aaKnown RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 BFSP1Q12934 665 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 GRM2Q14416 872 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 ANGPT1Q15389 498 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 SURF1Q15526 300 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 DUOXA2Q1HG44 320 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 BMT2Q1RMZ1 405 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 MGAT5BQ3V5L5 792 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 VITQ6UXI7 678 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 CEP57L1Q8IYX8 460 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 TMEM86AQ8N2M4 240 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 PJA1Q8NG27 643 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 SPPL2BQ8TCT7 592 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 ANKRD36BP1Q96IX9 119 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 LPIN3Q9BQK8 851 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 ACBD6Q9BR61 282 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 TRMT61BQ9BVS5 477 aaKnown RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 TMLHEQ9NVH6 421 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 MTF2Q9Y483 593 aaPredicted RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 UBE4BO95155 1302 aa12.06□□□□□ -0.48
C9orf85-201ENST00000334731 ZFHX2Q9C0A1 2572 aaPredicted RBP12.06□□□□□ -0.48
C9orf85-201ENST00000334731 A0A1B0GVL5 298 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 SHISA7A6NL88 538 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 FAM170BA6NMN3 283 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 GABRDO14764 452 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 KLRC4O43908 158 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 TNNC2P02585 160 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 GABRR2P28476 465 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 NBL1P41271 181 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 TSPY1Q01534 308 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 MYO1EQ12965 1108 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 SNRNP35Q16560 246 aaKnown RBP12.05□□□□□ -0.48
C9orf85-201ENST00000334731 KNOP1Q1ED39 458 aaKnown RBP12.05□□□□□ -0.48
C9orf85-201ENST00000334731 SOWAHAQ2M3V2 549 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 STXBP5Q5T5C0 1151 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 DPH6Q7L8W6 267 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 HS2ST1Q7LGA3 356 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 LIMS2Q7Z4I7 341 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 OSTM1Q86WC4 334 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 WDR49Q8IV35 697 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 MFSD6LQ8IWD5 586 aa12.05□□□□□ -0.48
C9orf85-201ENST00000334731 TOP6BLQ8N6T0 577 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms