RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 LRRC8DQ7L1W4 858 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 SPON2Q9BUD6 331 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.77
COL4A6-201ENST00000334504 APEX2Q9UBZ4 518 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 C2CD2Q9Y426 696 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PKP3Q9Y446 797 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 ZHX2Q9Y6X8 837 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PLEKHG1Q9ULL1 1385 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PHGDHO43175 533 aaKnown RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 ATMINO43313 823 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 DPYDQ12882 1025 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 NEDD8Q15843 81 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 CNGA2Q16280 664 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 ELMSAN1Q6PJG2 1045 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 MIER2Q8N344 545 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 BEST2Q8NFU1 509 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 FAM49AQ9H0Q0 323 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 GOLPH3Q9H4A6 298 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 EFCAB1Q9HAE3 211 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 PLEKHA5Q9HAU0 1116 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 PIDD1Q9HB75 910 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 VTA1Q9NP79 307 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 RAD17O75943 681 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 DDHD2O94830 711 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 LCA5LO95447 670 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 NME5P56597 212 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 ATP2C1P98194 919 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 CENPCQ03188 943 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 SYTL1Q8IYJ3 562 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 MCPH1Q8NEM0 835 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 XDHP47989 1333 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L15C9J2P7 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L13C9JLJ4 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L11C9JVI0 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L18D6R9N7 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L22D6RA61 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L17D6RBQ6 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L19D6RCP7 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L20D6RJB6 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 CHRNB3Q05901 458 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L24Q0WX57 530 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF772Q68DY9 489 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 FAM45BPQ6NSW5 357 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L6PQ6QN14 398 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 PPIL6Q8IXY8 311 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 STKLD1Q8NE28 680 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 STRBPQ96SI9 672 aaKnown RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 RPAP3Q9H6T3 665 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.21□□□□□ -0.78
COL4A6-201ENST00000334504 ABCC10Q5T3U5 1492 aa10.21□□□□□ -0.78
COL4A6-201ENST00000334504 NMT2O60551 498 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 FAM20BO75063 409 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 CYP2D6P10635 497 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ITGADQ13349 1161 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 WDR93Q6P2C0 686 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 LRRC74BQ6ZQY2 392 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 AHI1Q8N157 1196 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ZKSCAN4Q969J2 545 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ROGDIQ9GZN7 287 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ILKAPQ9H0C8 392 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 PABPC3Q9H361 631 aaKnown RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 KRT84Q9NSB2 600 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 SLC39A10Q9ULF5 831 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 LRCH1Q9Y2L9 728 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 TRIM43BA6NCK2 446 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 POLBP06746 335 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 HIST1H2AGP0C0S8 130 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 HIST1H2ADP20671 130 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 AQP5P55064 265 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ALDH6A1Q02252 535 aaKnown RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 SLC20A2Q08357 652 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 TRAF2Q12933 501 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 MMRN1Q13201 1228 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF57Q68EA5 555 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 JADE3Q92613 823 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 RMND5BQ96G75 393 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 HIST1H2AHQ96KK5 128 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 HIST1H2AJQ99878 128 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 H2AFJQ9BTM1 129 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 POLR3FQ9H1D9 316 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 RBAKQ9NYW8 714 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 PAK5Q9P286 719 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 KLHL3Q9UH77 587 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ZBTB5O15062 677 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 AVPR1AP37288 418 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 FOXR1Q6PIV2 292 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 TRAPPC11Q7Z392 1133 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ENKURQ8TC29 256 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 USP13Q92995 863 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 SERHL2Q9H4I8 314 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 SERHLQ9NQF3 203 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 PEX1O43933 1283 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 CNOT3O75175 753 aaKnown RBP10.2□□□□□ -0.78
COL4A6-201ENST00000334504 TNFAIP8O95379 198 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 UCHL3P15374 230 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms