RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 GP5P40197 560 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 UBA7P41226 1012 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 EXOC3L1Q86VI1 746 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 UTP15Q8TED0 518 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 AP3S1Q92572 193 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 FBRSQ9HAH7 460 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 EXOSC4Q9NPD3 245 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 HERC5Q9UII4 1024 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ARHGEF10O15013 1369 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 F8W8V4 182 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATP5BP06576 529 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAPK8P45983 427 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PIK3CGP48736 1102 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 NLRP11P59045 1033 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 GNG2P59768 71 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 IFI44LQ53G44 452 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 COMTD1Q86VU5 262 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CBWD2Q8IUF1 395 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZBTB8OSQ8IWT0 167 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 BBS7Q8IWZ6 715 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF655Q8N720 491 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCNYQ8ND76 341 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CERKQ8TCT0 537 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 USP7Q93009 1102 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 BRD7Q9NPI1 651 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRMT13Q9NUP7 481 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MED11Q9P086 117 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PLEKHA6Q9Y2H5 1048 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PTPRKQ15262 1439 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 STX16-NPEPL1H3BU86 382 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 DLG2Q15700 870 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CDK20Q8IZL9 346 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CNBD1Q8NA66 436 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ERMAPQ96PL5 475 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RBM42Q9BTD8 480 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF334Q9HCZ1 680 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ANGPT4Q9Y264 503 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CD151P48509 253 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ENPEPQ07075 957 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 HIF1AQ16665 826 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZCCHC7Q8N3Z6 543 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM104Q8NE00 496 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM167BQ9BTA0 163 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 USP44Q9H0E7 712 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CD274Q9NZQ7 290 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNAJB4Q9UDY4 337 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 AURKCQ9UQB9 309 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPP2R3BQ9Y5P8 575 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PTPN23Q9H3S7 1636 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PLOD2O00469 737 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RNF113AO15541 343 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MTHFSP49914 203 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 LIG4P49917 911 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 KRT24Q2M2I5 525 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MACC1Q6ZN28 852 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATAD1Q8NBU5 361 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 CLPTM1LQ96KA5 538 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM138Q9NPI0 162 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PIPSLA2A3N6 862 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MOCS3O95396 460 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PROCP04070 461 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RALBP11234 206 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TCF4P15884 667 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RAD51Q06609 339 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 UBE3CQ15386 1083 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PKN2Q16513 984 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM31Q5JXX7 168 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 C16orf59Q7L2K0 433 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 POC5Q8NA72 575 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC4A11Q8NBS3 891 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZDHHC12Q96GR4 267 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 NYAP2Q9P242 653 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 FARSAQ9Y285 508 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 KPNA5O15131 536 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 STX6O43752 255 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 FKBP6O75344 327 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 IDO1P14902 403 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 LBHQ53QV2 105 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTC22Q5TAA0 569 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 GTPBP3Q969Y2 492 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NCOR1P1Q9H4R4 102 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CD300AQ9UGN4 299 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NAIPQ13075 1403 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 SSX4O60224 188 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 NPPAP01160 153 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 FCER2P06734 321 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PNMA6AP0CW24 399 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ASMTP46597 345 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CAV1Q03135 178 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 ANO6Q4KMQ2 910 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 RAB44Q7Z6P3 723 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCDC105Q8IYK2 499 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 HDHD2Q9H0R4 259 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM50BQ9Y247 325 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PCDHB4Q9Y5E5 795 aa6.3□□□□□ -1.4
CDC42BPA-201ENST00000334218 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms