RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 SLC40A1Q9NP59 571 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 USH1CQ9Y6N9 552 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 ANKRD63C9JTQ0 380 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 B3GAT3O94766 335 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 ADCY2Q08462 1091 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 SLMAPQ14BN4 828 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 HP1BP3Q5SSJ5 553 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 CRYGNQ8WXF5 182 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 PAWRQ96IZ0 340 aaKnown RBP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 TSNARE1Q96NA8 513 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 SEZ6LQ9BYH1 1024 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 ARVCFO00192 962 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 BSPRYQ5W0U4 402 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 MAIP1Q8WWC4 291 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 SEC16BQ96JE7 1060 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 TRIM4Q9C037 500 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 LRRC4Q9HBW1 653 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 XPNPEP1Q9NQW7 623 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 ATP8B3O60423 1300 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 TISP43B9A030 160 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 ITGB3P05106 788 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 DARSP14868 501 aaKnown RBP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 SELPP16109 830 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 DRAP1Q14919 205 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 SNX17Q15036 470 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 MYCBPAPQ8TBZ2 947 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 FAM149B1Q96BN6 582 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 TSEN34Q9BSV6 310 aaKnown RBP12.45□□□□□ -0.42
HDAC6-201ENST00000334136 DPP3Q9NY33 737 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
HDAC6-201ENST00000334136 EXOC1LA0A1B0GW35 172 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 ENO4A6NNW6 628 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 DIAPH2O60879 1101 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 FAM107AO95990 144 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 CEP128Q6ZU80 1094 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 ENOSF1Q7L5Y1 443 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 TMEM169Q96HH4 297 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 HEMGNQ9BXL5 484 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 GTF2IRD1Q9UHL9 959 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 TNFSF13BQ9Y275 285 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 CAPN15O75808 1086 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 ATG7O95352 703 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 C22orf31O95567 290 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 BRAFP15056 766 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 ARL2P36404 184 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 MSH2P43246 934 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 PMS1P54277 932 aaKnown RBP12.44□□□□□ -0.42
HDAC6-201ENST00000334136 DRP2Q13474 957 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 SLC18A3Q16572 532 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 GRK7Q8WTQ7 553 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 P3H4Q92791 437 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 VCX3BQ9H321 246 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 C11orf49Q9H6J7 331 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 UBN1Q9NPG3 1134 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 SPATA24Q86W54 205 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 SCN4BQ8IWT1 228 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 KIF2BQ8N4N8 673 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 APPL2Q8NEU8 664 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 MIPOL1Q8TD10 442 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 MTMR12Q9C0I1 747 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 AAASQ9NRG9 546 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 PLAGL2Q9UPG8 496 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 B4GALT5O43286 388 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 POMCP01189 267 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 PAPD7Q5XG87 772 aaKnown RBP12.44□□□□□ -0.42
HDAC6-201ENST00000334136 DNAAF5Q86Y56 855 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 BSNDQ8WZ55 320 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 POP1Q99575 1024 aaKnown RBP12.44□□□□□ -0.42
HDAC6-201ENST00000334136 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 FTHL17Q9BXU8 183 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 RSAD1Q9HA92 442 aa12.44□□□□□ -0.42
HDAC6-201ENST00000334136 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■■■ 36.9
HDAC6-201ENST00000334136 CPB1P15086 417 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 CHN1P15882 459 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 ARF4P18085 180 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-201ENST00000334136 SLC9A1P19634 815 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 TAF6P49848 677 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 PTK7Q13308 1070 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 SV2CQ496J9 727 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 LRRC8DQ7L1W4 858 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 ZNF354CQ86Y25 554 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 SREK1Q8WXA9 508 aaKnown RBP12.43□□□□□ -0.42
HDAC6-201ENST00000334136 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
HDAC6-201ENST00000334136 AMHP03971 560 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 GLI1P08151 1106 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms