RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 SHROOM1Q2M3G4 852 aaPredicted RBP22.77■■□□□ 1.24
HOMER1-202ENST00000334082 FAM118BQ9BPY3 351 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 SMARCAD1Q9H4L7 1026 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 TMEM260Q9NX78 707 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 KANSL1LA0AUZ9 987 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 C18orf8Q96DM3 657 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 TUBGCP4Q9UGJ1 667 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 PSMB9P28065 219 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 CENPCQ03188 943 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 PPP1R18Q6NYC8 613 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 CYB5R4Q7L1T6 521 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 TBC1D10CQ8IV04 446 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 QKIQ96PU8 341 aaKnown RBP eCLIP22.77■■□□□ 1.244e-6■■■□□ 19.2
HOMER1-202ENST00000334082 TRPC7Q9HCX4 862 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 APEX2Q9UBZ4 518 aa22.77■■□□□ 1.24
HOMER1-202ENST00000334082 MED26O95402 600 aa22.77■■□□□ 1.23
HOMER1-202ENST00000334082 NT5C2P49902 561 aa22.77■■□□□ 1.23
HOMER1-202ENST00000334082 NAB2Q15742 525 aa22.77■■□□□ 1.23
HOMER1-202ENST00000334082 NANOGNBQ7Z5D8 188 aa22.77■■□□□ 1.23
HOMER1-202ENST00000334082 ATPAF2Q8N5M1 289 aa22.77■■□□□ 1.23
HOMER1-202ENST00000334082 ZNF483Q8TF39 744 aaPredicted RBP22.77■■□□□ 1.23
HOMER1-202ENST00000334082 ATP6V1B2P21281 511 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 LTKP29376 864 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 TAGLN3Q9UI15 199 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 PTPN7P35236 360 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 TWF2Q6IBS0 349 aaKnown RBP22.76■■□□□ 1.23
HOMER1-202ENST00000334082 METTL16Q86W50 562 aaKnown RBP22.76■■□□□ 1.23
HOMER1-202ENST00000334082 RNFT2Q96EX2 444 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 TNPO2O14787 897 aaKnown RBP22.76■■□□□ 1.23
HOMER1-202ENST00000334082 ITGAXP20702 1163 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 RPS7P62081 194 aaKnown RBP22.76■■□□□ 1.23
HOMER1-202ENST00000334082 ENKURQ8TC29 256 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 JADE3Q92613 823 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 COPG2Q9UBF2 871 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 PIGHQ14442 188 aaPredicted RBP22.76■■□□□ 1.23
HOMER1-202ENST00000334082 TAF2Q6P1X5 1199 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 ZBTB49Q6ZSB9 765 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 GIMAP8Q8ND71 665 aaPredicted RBP22.76■■□□□ 1.23
HOMER1-202ENST00000334082 STKLD1Q8NE28 680 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 MCEEQ96PE7 176 aa22.76■■□□□ 1.23
HOMER1-202ENST00000334082 TRIM49D1C9J1S8 452 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 P4HBP07237 508 aaKnown RBP22.75■■□□□ 1.23
HOMER1-202ENST00000334082 PRIM2P49643 509 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 KRT76Q01546 638 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 RAD9BQ6WBX8 426 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 TSPAN9O75954 239 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 KLHL12Q53G59 568 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 EFHC1Q5JVL4 640 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 KRCC1Q9NPI7 259 aaPredicted RBP22.75■■□□□ 1.23
HOMER1-202ENST00000334082 SEC31BQ9NQW1 1179 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 AGPAT5Q9NUQ2 364 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 SLC39A10Q9ULF5 831 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 H2AFYO75367 372 aaKnown RBP22.75■■□□□ 1.23
HOMER1-202ENST00000334082 MYL3P08590 195 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 CLEC4GQ6UXB4 293 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 PPIL6Q8IXY8 311 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 TJP2Q9UDY2 1190 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 PDE9AO76083 593 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 AKT1P31749 480 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 DCUN1D5Q9BTE7 237 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 ZNF302Q9NR11 478 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 AGO2Q9UKV8 859 aaKnown RBP22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L19D6RCP7 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L20D6RJB6 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 PIK3R1P27986 724 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 KRT20P35900 424 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L24Q0WX57 530 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 ZNF57Q68EA5 555 aaPredicted RBP22.75■■□□□ 1.23
HOMER1-202ENST00000334082 USP17L6PQ6QN14 398 aa22.75■■□□□ 1.23
HOMER1-202ENST00000334082 TRMT2AQ8IZ69 625 aaKnown RBP22.75■■□□□ 1.23
HOMER1-202ENST00000334082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 PDXKO00764 312 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 FXR1P51114 621 aaKnown RBP eCLIP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 POU4F1Q01851 419 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 OTOAQ7RTW8 1153 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 ZFRQ96KR1 1074 aaKnown RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 ROGDIQ9GZN7 287 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 AVENQ9NQS1 362 aaPredicted RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 EIF3LQ9Y262 564 aaKnown RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 SLC30A1Q9Y6M5 507 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 QARSP47897 775 aaKnown RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 DUOXA2Q1HG44 320 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 DGKKQ5KSL6 1271 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 RALAP11233 206 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 ALOX12P18054 663 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 NR1I3Q14994 352 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 NEK10Q6ZWH5 1172 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 SIX5Q8N196 739 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 COILP38432 576 aaPredicted RBP22.74■■□□□ 1.23
HOMER1-202ENST00000334082 RGS4P49798 205 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 PEX5P50542 639 aa22.74■■□□□ 1.23
HOMER1-202ENST00000334082 CASKIN2Q8WXE0 1202 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms